RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 DCAF8L2P0C7V8 631 aa6.68□□□□□ -1.34
RNF38-210ENST00000611646 NISCHQ9Y2I1 1504 aa6.57□□□□□ -1.36
RNF38-210ENST00000611646 SUPT5HO00267 1087 aaKnown RBP6.52□□□□□ -1.37
RNF38-210ENST00000611646 SHROOM4Q9ULL8 1493 aa6.48□□□□□ -1.37
RNF38-210ENST00000611646 EHMT2Q96KQ7 1210 aa6.37□□□□□ -1.39
RNF38-210ENST00000611646 PCGF6Q9BYE7 350 aa6.18□□□□□ -1.42
RNF38-210ENST00000611646 FAM9AQ8IZU1 332 aaPredicted RBP6.15□□□□□ -1.42
RNF38-210ENST00000611646 CHIC1Q5VXU3 224 aa6.14□□□□□ -1.43
RNF38-210ENST00000611646 TTBK1Q5TCY1 1321 aaPredicted RBP6.14□□□□□ -1.43
RNF38-210ENST00000611646 PPARGC1BQ86YN6 1023 aaKnown RBP6.01□□□□□ -1.45
RNF38-210ENST00000611646 RANGAP1P46060 587 aaPredicted RBP5.99□□□□□ -1.45
RNF38-210ENST00000611646 AEBP2Q6ZN18 517 aaPredicted RBP5.96□□□□□ -1.46
RNF38-210ENST00000611646 LOC105371045A0A1W2PR82 267 aa5.95□□□□□ -1.46
RNF38-210ENST00000611646 TRIM41Q8WV44 630 aa5.94□□□□□ -1.46
RNF38-210ENST00000611646 CCER1Q8TC90 406 aaPredicted RBP5.9□□□□□ -1.46
RNF38-210ENST00000611646 YTHDC1Q96MU7 727 aaKnown RBP5.89□□□□□ -1.47
RNF38-210ENST00000611646 HRCP23327 699 aa5.88□□□□□ -1.47
RNF38-210ENST00000611646 APLP2Q06481 763 aa5.87□□□□□ -1.47
RNF38-210ENST00000611646 UBTFP17480 764 aaKnown RBP5.82□□□□□ -1.48
RNF38-210ENST00000611646 TRIM26Q12899 539 aaPredicted RBP5.81□□□□□ -1.48
RNF38-210ENST00000611646 ZEB1P37275 1124 aaPredicted RBP5.79□□□□□ -1.48
RNF38-210ENST00000611646 ATP1B4Q9UN42 357 aaPredicted RBP5.79□□□□□ -1.48
RNF38-210ENST00000611646 CENPBP07199 599 aaPredicted RBP5.78□□□□□ -1.48
RNF38-210ENST00000611646 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.76□□□□□ -1.49
RNF38-210ENST00000611646 PELP1Q8IZL8 1130 aaKnown RBP5.75□□□□□ -1.49
RNF38-210ENST00000611646 ITGAEP38570 1179 aa5.72□□□□□ -1.49
RNF38-210ENST00000611646 HNRNPUL2Q1KMD3 747 aaKnown RBP5.72□□□□□ -1.49
RNF38-210ENST00000611646 CNGB1Q14028 1251 aaPredicted RBP5.65□□□□□ -1.51
RNF38-210ENST00000611646 DIEXFQ68CQ4 756 aaKnown RBP5.64□□□□□ -1.51
RNF38-210ENST00000611646 ERICH6Q7L0X2 663 aa5.62□□□□□ -1.51
RNF38-210ENST00000611646 GTF3C3Q9Y5Q9 886 aa5.6□□□□□ -1.51
RNF38-210ENST00000611646 PABPN1Q86U42 306 aaKnown RBP eCLIP5.6□□□□□ -1.51
RNF38-210ENST00000611646 MYO15BQ96JP2 1530 aa5.59□□□□□ -1.51
RNF38-210ENST00000611646 NEFLP07196 543 aa5.58□□□□□ -1.52
RNF38-210ENST00000611646 POLR3GLQ9BT43 218 aa5.58□□□□□ -1.52
RNF38-210ENST00000611646 ABCC9O60706 1549 aa5.58□□□□□ -1.52
RNF38-210ENST00000611646 BCANQ96GW7 911 aa5.57□□□□□ -1.52
RNF38-210ENST00000611646 NEUROD1Q13562 356 aa5.54□□□□□ -1.52
RNF38-210ENST00000611646 FAM50AQ14320 339 aaKnown RBP5.52□□□□□ -1.53
RNF38-210ENST00000611646 ACIN1Q9UKV3 1341 aaKnown RBP5.5□□□□□ -1.53
RNF38-210ENST00000611646 CCDC180Q9P1Z9 1646 aa5.49□□□□□ -1.53
RNF38-210ENST00000611646 SCAF1Q9H7N4 1312 aaKnown RBP5.49□□□□□ -1.53
RNF38-210ENST00000611646 ZNF316A6NFI3 1004 aaPredicted RBP5.48□□□□□ -1.53
RNF38-210ENST00000611646 P3H3Q8IVL6 736 aa5.47□□□□□ -1.53
RNF38-210ENST00000611646 MYT1Q01538 1121 aa5.47□□□□□ -1.53
RNF38-210ENST00000611646 SCRIBQ14160 1630 aa5.47□□□□□ -1.53
RNF38-210ENST00000611646 ZCCHC6Q5VYS8 1495 aaKnown RBP5.46□□□□□ -1.53
RNF38-210ENST00000611646 ARID3CA6NKF2 412 aa5.46□□□□□ -1.54
RNF38-210ENST00000611646 DCAF1Q9Y4B6 1507 aa5.44□□□□□ -1.54
RNF38-210ENST00000611646 CSRNP3Q8WYN3 585 aa5.44□□□□□ -1.54
RNF38-210ENST00000611646 TRIM52Q96A61 297 aa5.44□□□□□ -1.54
RNF38-210ENST00000611646 ZNF326Q5BKZ1 582 aaKnown RBP5.42□□□□□ -1.54
RNF38-210ENST00000611646 MYT1LQ9UL68 1186 aa5.41□□□□□ -1.54
RNF38-210ENST00000611646 HIRIP3Q9BW71 556 aaPredicted RBP5.4□□□□□ -1.54
RNF38-210ENST00000611646 MIER1Q8N108 512 aa5.4□□□□□ -1.54
RNF38-210ENST00000611646 ANP32CO43423 234 aa5.38□□□□□ -1.55
RNF38-210ENST00000611646 DDX10Q13206 875 aaKnown RBP5.37□□□□□ -1.55
RNF38-210ENST00000611646 SLC4A1APQ9BWU0 796 aaKnown RBP5.37□□□□□ -1.55
RNF38-210ENST00000611646 FKBP8Q14318 412 aa5.37□□□□□ -1.55
RNF38-210ENST00000611646 SENP3Q9H4L4 574 aaPredicted RBP5.35□□□□□ -1.55
RNF38-210ENST00000611646 SENP3-EIF4A1A0A087X0R7 540 aa5.35□□□□□ -1.55
RNF38-210ENST00000611646 DAXXQ9UER7 740 aaPredicted RBP5.35□□□□□ -1.55
RNF38-210ENST00000611646 IRX6P78412 446 aaPredicted RBP5.34□□□□□ -1.55
RNF38-210ENST00000611646 RSF1Q96T23 1441 aaPredicted RBP5.34□□□□□ -1.55
RNF38-210ENST00000611646 FBLN2P98095 1184 aa5.34□□□□□ -1.55
RNF38-210ENST00000611646 PHF23Q9BUL5 403 aaPredicted RBP5.32□□□□□ -1.56
RNF38-210ENST00000611646 CHIC2Q9UKJ5 165 aa5.32□□□□□ -1.56
RNF38-210ENST00000611646 CDK11AQ9UQ88 783 aaPredicted RBP5.31□□□□□ -1.56
RNF38-210ENST00000611646 BCL11AQ9H165 835 aa5.31□□□□□ -1.56
RNF38-210ENST00000611646 ZNF777Q9ULD5 760 aaPredicted RBP5.31□□□□□ -1.56
RNF38-210ENST00000611646 SALL2Q9Y467 1007 aaPredicted RBP5.31□□□□□ -1.56
RNF38-210ENST00000611646 CLSPNQ9HAW4 1339 aa5.31□□□□□ -1.56
RNF38-210ENST00000611646 FAM9BQ8IZU0 186 aa5.3□□□□□ -1.56
RNF38-210ENST00000611646 HNRNPUQ00839 825 aaKnown RBP eCLIP5.3□□□□□ -1.56
RNF38-210ENST00000611646 RTL5Q5HYW3 569 aaPredicted RBP5.3□□□□□ -1.56
RNF38-210ENST00000611646 NPM2Q86SE8 214 aaKnown RBP5.3□□□□□ -1.56
RNF38-210ENST00000611646 CEP162Q5TB80 1403 aa5.3□□□□□ -1.56
RNF38-210ENST00000611646 PLPPR3Q6T4P5 718 aa5.28□□□□□ -1.56
RNF38-210ENST00000611646 CLIP1P30622 1438 aa5.27□□□□□ -1.57
RNF38-210ENST00000611646 CECR2Q9BXF3 1484 aa5.27□□□□□ -1.57
RNF38-210ENST00000611646 TONSLQ96HA7 1378 aa5.26□□□□□ -1.57
RNF38-210ENST00000611646 NBR1Q14596 966 aa5.25□□□□□ -1.57
RNF38-210ENST00000611646 SOGA1O94964 1423 aa5.25□□□□□ -1.57
RNF38-210ENST00000611646 SIN3AQ96ST3 1273 aa5.25□□□□□ -1.57
RNF38-210ENST00000611646 RB1CC1Q8TDY2 1594 aa5.24□□□□□ -1.57
RNF38-210ENST00000611646 RRP7BPQ9NSQ0 103 aa5.24□□□□□ -1.57
RNF38-210ENST00000611646 KDM2AQ9Y2K7 1162 aa5.22□□□□□ -1.57
RNF38-210ENST00000611646 ABCC8Q09428 1581 aa5.21□□□□□ -1.57
RNF38-210ENST00000611646 MRS2Q9HD23 443 aa5.21□□□□□ -1.58
RNF38-210ENST00000611646 GOLGA3Q08378 1498 aa5.21□□□□□ -1.58
RNF38-210ENST00000611646 SUPT16HQ9Y5B9 1047 aaKnown RBP5.2□□□□□ -1.58
RNF38-210ENST00000611646 CANXP27824 592 aaKnown RBP5.2□□□□□ -1.58
RNF38-210ENST00000611646 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.2□□□□□ -1.58
RNF38-210ENST00000611646 ANP32AP39687 249 aaKnown RBP5.2□□□□□ -1.58
RNF38-210ENST00000611646 WRNQ14191 1432 aaPredicted RBP eCLIP5.2□□□□□ -1.58
RNF38-210ENST00000611646 TNIKQ9UKE5 1360 aa5.19□□□□□ -1.58
RNF38-210ENST00000611646 KANK4Q5T7N3 995 aaPredicted RBP5.19□□□□□ -1.58
RNF38-210ENST00000611646 CCDC88BA6NC98 1476 aa5.19□□□□□ -1.58
RNF38-210ENST00000611646 ARXQ96QS3 562 aa5.18□□□□□ -1.58
RNF38-210ENST00000611646 CCDC136Q96JN2 1154 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms