RNA–Protein interactions for RNA: ENST00000640040.1

NANOGNB-202, Transcript of NANOG neighbor homeobox, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NANOGNB, Length 824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGNB-202ENST00000640040 AEBP2Q6ZN18 517 aaPredicted RBP24.18■■□□□ 1.46
NANOGNB-202ENST00000640040 CHIC1Q5VXU3 224 aa23.22■■□□□ 1.31
NANOGNB-202ENST00000640040 SENP3Q9H4L4 574 aaPredicted RBP20.78■□□□□ 0.92
NANOGNB-202ENST00000640040 PHF23Q9BUL5 403 aaPredicted RBP20.44■□□□□ 0.86
NANOGNB-202ENST00000640040 FOXD1Q16676 465 aa19.23■□□□□ 0.67
NANOGNB-202ENST00000640040 PLPPR3Q6T4P5 718 aa18.7■□□□□ 0.58
NANOGNB-202ENST00000640040 PIAS4Q8N2W9 510 aaPredicted RBP18.09■□□□□ 0.49
NANOGNB-202ENST00000640040 MSH5O43196 834 aa18.08■□□□□ 0.48
NANOGNB-202ENST00000640040 ADRA2BP18089 450 aa18.01■□□□□ 0.47
NANOGNB-202ENST00000640040 PPP6R1Q9UPN7 881 aa18.01■□□□□ 0.47
NANOGNB-202ENST00000640040 POTEDQ86YR6 584 aa17.25■□□□□ 0.35
NANOGNB-202ENST00000640040 SCAF1Q9H7N4 1312 aaKnown RBP16.69■□□□□ 0.26
NANOGNB-202ENST00000640040 MAPK8IP2Q13387 824 aaPredicted RBP16.46■□□□□ 0.23
NANOGNB-202ENST00000640040 DMRT2Q9Y5R5 561 aa16.46■□□□□ 0.23
NANOGNB-202ENST00000640040 PPP4R3CPQ6ZMV5 832 aa16.34■□□□□ 0.21
NANOGNB-202ENST00000640040 CNKSR2Q8WXI2 1034 aa16.05■□□□□ 0.16
NANOGNB-202ENST00000640040 HOXD11P31277 338 aaPredicted RBP15.9■□□□□ 0.14
NANOGNB-202ENST00000640040 NCBP3Q53F19 620 aaKnown RBP15.88■□□□□ 0.13
NANOGNB-202ENST00000640040 RNF216Q9NWF9 866 aaPredicted RBP15.86■□□□□ 0.13
NANOGNB-202ENST00000640040 DCAF8L1A6NGE4 600 aa15.81■□□□□ 0.12
NANOGNB-202ENST00000640040 NPM3O75607 178 aaKnown RBP15.52■□□□□ 0.08
NANOGNB-202ENST00000640040 DNAJC5BQ9UF47 199 aa15.4■□□□□ 0.06
NANOGNB-202ENST00000640040 CACNB1Q02641 598 aaPredicted RBP15.37■□□□□ 0.05
NANOGNB-202ENST00000640040 RNF39Q9H2S5 420 aa15.35■□□□□ 0.05
NANOGNB-202ENST00000640040 KCNA4P22459 653 aa15.33■□□□□ 0.04
NANOGNB-202ENST00000640040 C1QBPQ07021 282 aaKnown RBP15.21■□□□□ 0.03
NANOGNB-202ENST00000640040 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.21■□□□□ 0.03
NANOGNB-202ENST00000640040 U3KPZ7 1027 aaPredicted RBP14.83□□□□□ -0.04
NANOGNB-202ENST00000640040 SLC4A2P04920 1241 aa14.73□□□□□ -0.05
NANOGNB-202ENST00000640040 APLP2Q06481 763 aa14.66□□□□□ -0.06
NANOGNB-202ENST00000640040 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.64□□□□□ -0.07
NANOGNB-202ENST00000640040 HNRNPUL2Q1KMD3 747 aaKnown RBP14.64□□□□□ -0.07
NANOGNB-202ENST00000640040 CAPN15O75808 1086 aa14.6□□□□□ -0.07
NANOGNB-202ENST00000640040 SLC4A1APQ9BWU0 796 aaKnown RBP14.58□□□□□ -0.08
NANOGNB-202ENST00000640040 SPINK5Q9NQ38 1064 aaPredicted RBP14.53□□□□□ -0.08
NANOGNB-202ENST00000640040 SAMD1Q6SPF0 538 aaPredicted RBP14.52□□□□□ -0.09
NANOGNB-202ENST00000640040 ZNF219Q9P2Y4 722 aaPredicted RBP14.45□□□□□ -0.1
NANOGNB-202ENST00000640040 MYCNP04198 464 aaPredicted RBP14.44□□□□□ -0.1
NANOGNB-202ENST00000640040 DSG3P32926 999 aa14.42□□□□□ -0.1
NANOGNB-202ENST00000640040 TRHP20396 242 aaPredicted RBP14.38□□□□□ -0.11
NANOGNB-202ENST00000640040 FOXD4L1Q9NU39 408 aa14.36□□□□□ -0.11
NANOGNB-202ENST00000640040 ABCB7O75027 752 aa14.21□□□□□ -0.13
NANOGNB-202ENST00000640040 ZBTB22O15209 634 aa14.03□□□□□ -0.16
NANOGNB-202ENST00000640040 POLA2Q14181 598 aa14.01□□□□□ -0.17
NANOGNB-202ENST00000640040 ATXN8OSP0DMR3 200 aa13.92□□□□□ -0.18
NANOGNB-202ENST00000640040 RBM42Q9BTD8 480 aaKnown RBP13.91□□□□□ -0.18
NANOGNB-202ENST00000640040 ATF5Q9Y2D1 282 aaPredicted RBP13.91□□□□□ -0.18
NANOGNB-202ENST00000640040 ZBTB12Q9Y330 459 aaPredicted RBP13.9□□□□□ -0.18
NANOGNB-202ENST00000640040 POTEHQ6S545 545 aa13.59□□□□□ -0.23
NANOGNB-202ENST00000640040 FBLN2P98095 1184 aa13.58□□□□□ -0.24
NANOGNB-202ENST00000640040 OSCARQ8IYS5 282 aa13.57□□□□□ -0.24
NANOGNB-202ENST00000640040 CSRNP3Q8WYN3 585 aa13.57□□□□□ -0.24
NANOGNB-202ENST00000640040 AKT1S1Q96B36 256 aa13.55□□□□□ -0.24
NANOGNB-202ENST00000640040 EHMT2Q96KQ7 1210 aa13.54□□□□□ -0.24
NANOGNB-202ENST00000640040 CHRDL2Q6WN34 429 aa13.43□□□□□ -0.26
NANOGNB-202ENST00000640040 SPDYE2BA6NHP3 402 aa13.4□□□□□ -0.26
NANOGNB-202ENST00000640040 SPDYE6P0CI01 402 aa13.4□□□□□ -0.26
NANOGNB-202ENST00000640040 SPDYE2Q495Y8 402 aa13.4□□□□□ -0.26
NANOGNB-202ENST00000640040 REM2Q8IYK8 340 aaPredicted RBP13.36□□□□□ -0.27
NANOGNB-202ENST00000640040 MKRN4PQ13434 485 aaPredicted RBP13.32□□□□□ -0.28
NANOGNB-202ENST00000640040 ZNF692Q9BU19 519 aaPredicted RBP13.24□□□□□ -0.29
NANOGNB-202ENST00000640040 PITPNM1O00562 1244 aa13.22□□□□□ -0.29
NANOGNB-202ENST00000640040 SSUH2Q9Y2M2 353 aa13.19□□□□□ -0.3
NANOGNB-202ENST00000640040 SPDYE1Q8NFV5 336 aaPredicted RBP13.14□□□□□ -0.31
NANOGNB-202ENST00000640040 PIP4P2Q8N4L2 257 aa13.11□□□□□ -0.31
NANOGNB-202ENST00000640040 FXR2P51116 673 aaKnown RBP eCLIP13.07□□□□□ -0.32
NANOGNB-202ENST00000640040 CLEC11AQ9Y240 323 aa13.07□□□□□ -0.32
NANOGNB-202ENST00000640040 PABPN1Q86U42 306 aaKnown RBP eCLIP13.03□□□□□ -0.32
NANOGNB-202ENST00000640040 PRKAR2AP13861 404 aaKnown RBP12.91□□□□□ -0.34
NANOGNB-202ENST00000640040 PRR29P0C7W0 189 aa12.89□□□□□ -0.35
NANOGNB-202ENST00000640040 HAX1O00165 279 aa12.88□□□□□ -0.35
NANOGNB-202ENST00000640040 SPDYE4A6NLX3 237 aa12.87□□□□□ -0.35
NANOGNB-202ENST00000640040 SP7Q8TDD2 431 aaPredicted RBP12.84□□□□□ -0.35
NANOGNB-202ENST00000640040 STAG3Q9UJ98 1225 aa12.8□□□□□ -0.36
NANOGNB-202ENST00000640040 CHADLQ6NUI6 762 aa12.73□□□□□ -0.37
NANOGNB-202ENST00000640040 C19orf67A6NJJ6 358 aa12.65□□□□□ -0.38
NANOGNB-202ENST00000640040 FARP1Q9Y4F1 1045 aaPredicted RBP12.61□□□□□ -0.39
NANOGNB-202ENST00000640040 EVX2Q03828 476 aa12.57□□□□□ -0.4
NANOGNB-202ENST00000640040 PROM2Q8N271 834 aa12.54□□□□□ -0.4
NANOGNB-202ENST00000640040 CREBZFQ9NS37 354 aa12.53□□□□□ -0.4
NANOGNB-202ENST00000640040 CD44P16070 742 aaKnown RBP12.52□□□□□ -0.41
NANOGNB-202ENST00000640040 NPM1P06748 294 aaKnown RBP eCLIP12.44□□□□□ -0.42
NANOGNB-202ENST00000640040 CLCN6P51797 869 aa12.43□□□□□ -0.42
NANOGNB-202ENST00000640040 GABBR2O75899 941 aa12.41□□□□□ -0.42
NANOGNB-202ENST00000640040 PAK3O75914 559 aaPredicted RBP12.41□□□□□ -0.42
NANOGNB-202ENST00000640040 PLEKHG5O94827 1062 aa12.39□□□□□ -0.43
NANOGNB-202ENST00000640040 FKBP8Q14318 412 aa12.37□□□□□ -0.43
NANOGNB-202ENST00000640040 ZRANB1Q9UGI0 708 aa12.36□□□□□ -0.43
NANOGNB-202ENST00000640040 ZNF579Q8NAF0 562 aaKnown RBP12.34□□□□□ -0.43
NANOGNB-202ENST00000640040 MNX1P50219 401 aaPredicted RBP12.3□□□□□ -0.44
NANOGNB-202ENST00000640040 MIER1Q8N108 512 aa12.26□□□□□ -0.45
NANOGNB-202ENST00000640040 PLCD3Q8N3E9 789 aa12.23□□□□□ -0.45
NANOGNB-202ENST00000640040 ZBTB47Q9UFB7 747 aaPredicted RBP12.22□□□□□ -0.45
NANOGNB-202ENST00000640040 DCBLD2Q96PD2 775 aa12.2□□□□□ -0.46
NANOGNB-202ENST00000640040 FBXO3Q9UK99 471 aa12.19□□□□□ -0.46
NANOGNB-202ENST00000640040 PHF12Q96QT6 1004 aa12.15□□□□□ -0.46
NANOGNB-202ENST00000640040 TSPYL2Q9H2G4 693 aaPredicted RBP12.12□□□□□ -0.47
NANOGNB-202ENST00000640040 GALR2O43603 387 aaPredicted RBP12.11□□□□□ -0.47
NANOGNB-202ENST00000640040 POTEIP0CG38 1075 aa12.07□□□□□ -0.48
NANOGNB-202ENST00000640040 CCDC61Q9Y6R9 512 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms