Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC127024.6-201ENST00000621598 424 ntBASIC7.46□□□□□ -1.22
LRCH3Q96II8 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
LRCH3Q96II8 MPP6-209ENST00000625307 126 ntTSL 5 BASIC7.46□□□□□ -1.22
LRCH3Q96II8 WDR75-207ENST00000631047 270 ntTSL 5 BASIC7.46□□□□□ -1.22
LRCH3Q96II8 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC7.46□□□□□ -1.22
LRCH3Q96II8 AC008013.2-202ENST00000637965 364 ntBASIC7.46□□□□□ -1.22
LRCH3Q96II8 CCDC162P-202ENST00000368966 6751 ntBASIC7.46□□□□□ -1.22
LRCH3Q96II8 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
LRCH3Q96II8 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC7.46□□□□□ -1.22
LRCH3Q96II8 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.46□□□□□ -1.22
LRCH3Q96II8 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.46□□□□□ -1.22
LRCH3Q96II8 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
LRCH3Q96II8 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
LRCH3Q96II8 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
LRCH3Q96II8 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
LRCH3Q96II8 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
LRCH3Q96II8 AC005034.3-201ENST00000604845 1747 ntBASIC7.46□□□□□ -1.22
LRCH3Q96II8 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC7.46□□□□□ -1.22
LRCH3Q96II8 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.46□□□□□ -1.22
LRCH3Q96II8 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
LRCH3Q96II8 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
LRCH3Q96II8 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC7.46□□□□□ -1.22
LRCH3Q96II8 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
LRCH3Q96II8 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
LRCH3Q96II8 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC7.46□□□□□ -1.22
LRCH3Q96II8 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.45□□□□□ -1.22
LRCH3Q96II8 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC7.45□□□□□ -1.22
LRCH3Q96II8 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
LRCH3Q96II8 AC011008.2-201ENST00000624866 3352 ntBASIC7.45□□□□□ -1.22
LRCH3Q96II8 SAMMSON-222ENST00000641901 2727 ntBASIC7.45□□□□□ -1.22
LRCH3Q96II8 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.45□□□□□ -1.22
LRCH3Q96II8 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
LRCH3Q96II8 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
LRCH3Q96II8 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
LRCH3Q96II8 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
LRCH3Q96II8 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
LRCH3Q96II8 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
LRCH3Q96II8 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
LRCH3Q96II8 GMFG-201ENST00000253054 616 ntTSL 5 BASIC7.45□□□□□ -1.22
LRCH3Q96II8 RNU6-251P-201ENST00000363235 104 ntBASIC7.45□□□□□ -1.22
LRCH3Q96II8 Y_RNA.212-201ENST00000364177 102 ntBASIC7.45□□□□□ -1.22
LRCH3Q96II8 RNA5SP240-201ENST00000365355 128 ntBASIC7.45□□□□□ -1.22
LRCH3Q96II8 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
LRCH3Q96II8 RNA5SP178-201ENST00000410380 128 ntBASIC7.45□□□□□ -1.22
LRCH3Q96II8 RN7SKP254-201ENST00000410685 310 ntBASIC7.45□□□□□ -1.22
LRCH3Q96II8 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC7.45□□□□□ -1.22
LRCH3Q96II8 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC7.45□□□□□ -1.22
LRCH3Q96II8 CHIAP3-201ENST00000423668 1133 ntBASIC7.45□□□□□ -1.22
LRCH3Q96II8 MTND6P12-201ENST00000428247 522 ntBASIC7.45□□□□□ -1.22
LRCH3Q96II8 OR4K11P-201ENST00000431829 904 ntBASIC7.45□□□□□ -1.22
LRCH3Q96II8 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC7.45□□□□□ -1.22
LRCH3Q96II8 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC7.45□□□□□ -1.22
LRCH3Q96II8 AL132765.1-201ENST00000434165 553 ntBASIC7.45□□□□□ -1.22
LRCH3Q96II8 AL954705.1-201ENST00000435277 559 ntBASIC7.45□□□□□ -1.22
LRCH3Q96II8 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC7.45□□□□□ -1.22
LRCH3Q96II8 GAPDHP20-201ENST00000444107 1007 ntBASIC7.45□□□□□ -1.22
LRCH3Q96II8 PTMAP1-205ENST00000455552 325 ntBASIC7.45□□□□□ -1.22
LRCH3Q96II8 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.45□□□□□ -1.22
LRCH3Q96II8 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.45□□□□□ -1.22
LRCH3Q96II8 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC7.45□□□□□ -1.22
LRCH3Q96II8 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC7.45□□□□□ -1.22
LRCH3Q96II8 SNORD46.2-201ENST00000516021 102 ntBASIC7.45□□□□□ -1.22
LRCH3Q96II8 COX6CP8-201ENST00000522620 226 ntBASIC7.45□□□□□ -1.22
LRCH3Q96II8 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC7.45□□□□□ -1.22
LRCH3Q96II8 AL356432.3-201ENST00000568952 465 ntBASIC7.45□□□□□ -1.22
LRCH3Q96II8 OR4K8P-201ENST00000578842 1048 ntBASIC7.45□□□□□ -1.22
LRCH3Q96II8 AC015818.6-201ENST00000584274 634 ntBASIC7.45□□□□□ -1.22
LRCH3Q96II8 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC7.45□□□□□ -1.22
LRCH3Q96II8 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC7.45□□□□□ -1.22
LRCH3Q96II8 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC7.45□□□□□ -1.22
LRCH3Q96II8 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC7.45□□□□□ -1.22
LRCH3Q96II8 AC211433.2-201ENST00000608433 387 ntBASIC7.45□□□□□ -1.22
LRCH3Q96II8 AL589743.6-201ENST00000611025 117 ntBASIC7.45□□□□□ -1.22
LRCH3Q96II8 AC099667.1-201ENST00000624222 469 ntBASIC7.45□□□□□ -1.22
LRCH3Q96II8 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.45□□□□□ -1.22
LRCH3Q96II8 CCT5-215ENST00000625723 135 ntTSL 5 BASIC7.45□□□□□ -1.22
LRCH3Q96II8 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC7.45□□□□□ -1.22
LRCH3Q96II8 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
LRCH3Q96II8 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC7.45□□□□□ -1.22
LRCH3Q96II8 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
LRCH3Q96II8 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
LRCH3Q96II8 AC018688.1-201ENST00000636528 1754 ntBASIC7.45□□□□□ -1.22
LRCH3Q96II8 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.45□□□□□ -1.22
LRCH3Q96II8 AC119674.1-204ENST00000641348 1343 ntBASIC7.45□□□□□ -1.22
LRCH3Q96II8 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC7.45□□□□□ -1.22
LRCH3Q96II8 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC7.45□□□□□ -1.22
LRCH3Q96II8 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
LRCH3Q96II8 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC7.45□□□□□ -1.22
LRCH3Q96II8 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC7.45□□□□□ -1.22
LRCH3Q96II8 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC7.44□□□□□ -1.22
LRCH3Q96II8 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LRCH3Q96II8 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LRCH3Q96II8 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
LRCH3Q96II8 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LRCH3Q96II8 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LRCH3Q96II8 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
LRCH3Q96II8 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
LRCH3Q96II8 AC078880.4-201ENST00000617627 1749 ntBASIC7.44□□□□□ -1.22
LRCH3Q96II8 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
LRCH3Q96II8 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms