Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC23.22■■□□□ 1.31
DDX49Q9Y6V7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
DDX49Q9Y6V7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
DDX49Q9Y6V7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC23.21■■□□□ 1.31
DDX49Q9Y6V7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC23.21■■□□□ 1.31
DDX49Q9Y6V7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX49Q9Y6V7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC23.21■■□□□ 1.31
DDX49Q9Y6V7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC23.21■■□□□ 1.31
DDX49Q9Y6V7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC23.21■■□□□ 1.31
DDX49Q9Y6V7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC23.21■■□□□ 1.31
DDX49Q9Y6V7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX49Q9Y6V7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC23.21■■□□□ 1.31
DDX49Q9Y6V7 Z99916.2-201ENST00000604037 246 ntBASIC23.21■■□□□ 1.31
DDX49Q9Y6V7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
DDX49Q9Y6V7 BX119927.1-201ENST00000636596 1552 ntBASIC23.21■■□□□ 1.31
DDX49Q9Y6V7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC23.21■■□□□ 1.31
DDX49Q9Y6V7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX49Q9Y6V7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.31
DDX49Q9Y6V7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.31
DDX49Q9Y6V7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DDX49Q9Y6V7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
DDX49Q9Y6V7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
DDX49Q9Y6V7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC23.2■■□□□ 1.3
DDX49Q9Y6V7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
DDX49Q9Y6V7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
DDX49Q9Y6V7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
DDX49Q9Y6V7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
DDX49Q9Y6V7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC23.2■■□□□ 1.3
DDX49Q9Y6V7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
DDX49Q9Y6V7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC23.2■■□□□ 1.3
DDX49Q9Y6V7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DDX49Q9Y6V7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC23.2■■□□□ 1.3
DDX49Q9Y6V7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC23.2■■□□□ 1.3
DDX49Q9Y6V7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
DDX49Q9Y6V7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
DDX49Q9Y6V7 KRT17P3-201ENST00000420566 1262 ntBASIC23.2■■□□□ 1.3
DDX49Q9Y6V7 HES2-205ENST00000487437 968 ntTSL 3 BASIC23.2■■□□□ 1.3
DDX49Q9Y6V7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC23.2■■□□□ 1.3
DDX49Q9Y6V7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
DDX49Q9Y6V7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC23.2■■□□□ 1.3
DDX49Q9Y6V7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC23.2■■□□□ 1.3
DDX49Q9Y6V7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC23.2■■□□□ 1.3
DDX49Q9Y6V7 FAM197Y4-202ENST00000622692 608 ntBASIC23.2■■□□□ 1.3
DDX49Q9Y6V7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC23.2■■□□□ 1.3
DDX49Q9Y6V7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
DDX49Q9Y6V7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
DDX49Q9Y6V7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DDX49Q9Y6V7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC23.2■■□□□ 1.3
DDX49Q9Y6V7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DDX49Q9Y6V7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DDX49Q9Y6V7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DDX49Q9Y6V7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
DDX49Q9Y6V7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
DDX49Q9Y6V7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
DDX49Q9Y6V7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
DDX49Q9Y6V7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC23.19■■□□□ 1.3
DDX49Q9Y6V7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.19■■□□□ 1.3
DDX49Q9Y6V7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
DDX49Q9Y6V7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DDX49Q9Y6V7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DDX49Q9Y6V7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DDX49Q9Y6V7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC23.19■■□□□ 1.3
DDX49Q9Y6V7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DDX49Q9Y6V7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DDX49Q9Y6V7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DDX49Q9Y6V7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC23.19■■□□□ 1.3
DDX49Q9Y6V7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
DDX49Q9Y6V7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC23.18■■□□□ 1.3
DDX49Q9Y6V7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX49Q9Y6V7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX49Q9Y6V7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX49Q9Y6V7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC23.18■■□□□ 1.3
DDX49Q9Y6V7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC23.18■■□□□ 1.3
DDX49Q9Y6V7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC23.18■■□□□ 1.3
DDX49Q9Y6V7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX49Q9Y6V7 POM121L13P-201ENST00000422362 380 ntBASIC23.18■■□□□ 1.3
DDX49Q9Y6V7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC23.18■■□□□ 1.3
DDX49Q9Y6V7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
DDX49Q9Y6V7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX49Q9Y6V7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
DDX49Q9Y6V7 AL356652.1-201ENST00000615962 565 ntBASIC23.18■■□□□ 1.3
DDX49Q9Y6V7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX49Q9Y6V7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX49Q9Y6V7 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX49Q9Y6V7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
DDX49Q9Y6V7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX49Q9Y6V7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX49Q9Y6V7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX49Q9Y6V7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX49Q9Y6V7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX49Q9Y6V7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC23.17■■□□□ 1.3
DDX49Q9Y6V7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC23.17■■□□□ 1.3
DDX49Q9Y6V7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
DDX49Q9Y6V7 AC020763.4-201ENST00000623414 4170 ntBASIC23.17■■□□□ 1.3
DDX49Q9Y6V7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX49Q9Y6V7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX49Q9Y6V7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
DDX49Q9Y6V7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
DDX49Q9Y6V7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
DDX49Q9Y6V7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms