Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.31■□□□□ 0.52
CLCA3PQ9Y6N3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CLCA3PQ9Y6N3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLCA3PQ9Y6N3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.31■□□□□ 0.52
CLCA3PQ9Y6N3 AL135905.2-201ENST00000584934 1404 ntBASIC18.31■□□□□ 0.52
CLCA3PQ9Y6N3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.31■□□□□ 0.52
CLCA3PQ9Y6N3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLCA3PQ9Y6N3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCA3PQ9Y6N3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCA3PQ9Y6N3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CLCA3PQ9Y6N3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCA3PQ9Y6N3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLCA3PQ9Y6N3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CLCA3PQ9Y6N3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CLCA3PQ9Y6N3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCA3PQ9Y6N3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCA3PQ9Y6N3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCA3PQ9Y6N3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLCA3PQ9Y6N3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLCA3PQ9Y6N3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLCA3PQ9Y6N3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLCA3PQ9Y6N3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.3■□□□□ 0.52
CLCA3PQ9Y6N3 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.3■□□□□ 0.52
CLCA3PQ9Y6N3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.3■□□□□ 0.52
CLCA3PQ9Y6N3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.3■□□□□ 0.52
CLCA3PQ9Y6N3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.3■□□□□ 0.52
CLCA3PQ9Y6N3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.3■□□□□ 0.52
CLCA3PQ9Y6N3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCA3PQ9Y6N3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCA3PQ9Y6N3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCA3PQ9Y6N3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CLCA3PQ9Y6N3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCA3PQ9Y6N3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 KRT18P16-201ENST00000510337 1294 ntBASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 AC066615.1-201ENST00000640911 628 ntBASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.29■□□□□ 0.52
CLCA3PQ9Y6N3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLCA3PQ9Y6N3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CLCA3PQ9Y6N3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCA3PQ9Y6N3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.28■□□□□ 0.52
CLCA3PQ9Y6N3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CLCA3PQ9Y6N3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.28■□□□□ 0.52
CLCA3PQ9Y6N3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CLCA3PQ9Y6N3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCA3PQ9Y6N3 MIR718-201ENST00000390190 70 ntBASIC18.28■□□□□ 0.52
CLCA3PQ9Y6N3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLCA3PQ9Y6N3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CLCA3PQ9Y6N3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.28■□□□□ 0.52
CLCA3PQ9Y6N3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLCA3PQ9Y6N3 AC008550.1-201ENST00000511500 884 ntBASIC18.28■□□□□ 0.52
CLCA3PQ9Y6N3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.28■□□□□ 0.52
CLCA3PQ9Y6N3 RARRES2P10-201ENST00000564312 460 ntBASIC18.28■□□□□ 0.52
CLCA3PQ9Y6N3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CLCA3PQ9Y6N3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCA3PQ9Y6N3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCA3PQ9Y6N3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.28■□□□□ 0.52
CLCA3PQ9Y6N3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLCA3PQ9Y6N3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLCA3PQ9Y6N3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCA3PQ9Y6N3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCA3PQ9Y6N3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCA3PQ9Y6N3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CLCA3PQ9Y6N3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CLCA3PQ9Y6N3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLCA3PQ9Y6N3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCA3PQ9Y6N3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.28■□□□□ 0.52
CLCA3PQ9Y6N3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLCA3PQ9Y6N3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CLCA3PQ9Y6N3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CLCA3PQ9Y6N3 HTR7P1-201ENST00000538670 1336 ntBASIC18.27■□□□□ 0.52
CLCA3PQ9Y6N3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCA3PQ9Y6N3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms