Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1G3Q9Y6M4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1G3Q9Y6M4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CSNK1G3Q9Y6M4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1G3Q9Y6M4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1G3Q9Y6M4 BX664615.1-201ENST00000443558 458 ntBASIC18.98■□□□□ 0.63
CSNK1G3Q9Y6M4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.98■□□□□ 0.63
CSNK1G3Q9Y6M4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
CSNK1G3Q9Y6M4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1G3Q9Y6M4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1G3Q9Y6M4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CSNK1G3Q9Y6M4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.98■□□□□ 0.63
CSNK1G3Q9Y6M4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1G3Q9Y6M4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1G3Q9Y6M4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1G3Q9Y6M4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.97■□□□□ 0.63
CSNK1G3Q9Y6M4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1G3Q9Y6M4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1G3Q9Y6M4 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
CSNK1G3Q9Y6M4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1G3Q9Y6M4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1G3Q9Y6M4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1G3Q9Y6M4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1G3Q9Y6M4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CSNK1G3Q9Y6M4 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.97■□□□□ 0.63
CSNK1G3Q9Y6M4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.97■□□□□ 0.63
CSNK1G3Q9Y6M4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1G3Q9Y6M4 AL160286.2-201ENST00000567150 934 ntBASIC18.97■□□□□ 0.63
CSNK1G3Q9Y6M4 AC010653.2-201ENST00000623505 997 ntBASIC18.97■□□□□ 0.63
CSNK1G3Q9Y6M4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.97■□□□□ 0.63
CSNK1G3Q9Y6M4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.97■□□□□ 0.63
CSNK1G3Q9Y6M4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1G3Q9Y6M4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.97■□□□□ 0.63
CSNK1G3Q9Y6M4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.97■□□□□ 0.63
CSNK1G3Q9Y6M4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1G3Q9Y6M4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1G3Q9Y6M4 AC020907.5-201ENST00000624372 1936 ntBASIC18.96■□□□□ 0.63
CSNK1G3Q9Y6M4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1G3Q9Y6M4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1G3Q9Y6M4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1G3Q9Y6M4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CSNK1G3Q9Y6M4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CSNK1G3Q9Y6M4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.96■□□□□ 0.63
CSNK1G3Q9Y6M4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.96■□□□□ 0.63
CSNK1G3Q9Y6M4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
CSNK1G3Q9Y6M4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.96■□□□□ 0.63
CSNK1G3Q9Y6M4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1G3Q9Y6M4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CSNK1G3Q9Y6M4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.96■□□□□ 0.63
CSNK1G3Q9Y6M4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.96■□□□□ 0.63
CSNK1G3Q9Y6M4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CSNK1G3Q9Y6M4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1G3Q9Y6M4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CSNK1G3Q9Y6M4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CSNK1G3Q9Y6M4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CSNK1G3Q9Y6M4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1G3Q9Y6M4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1G3Q9Y6M4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.96■□□□□ 0.63
CSNK1G3Q9Y6M4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.96■□□□□ 0.63
CSNK1G3Q9Y6M4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1G3Q9Y6M4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1G3Q9Y6M4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.95■□□□□ 0.62
CSNK1G3Q9Y6M4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1G3Q9Y6M4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1G3Q9Y6M4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1G3Q9Y6M4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1G3Q9Y6M4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CSNK1G3Q9Y6M4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1G3Q9Y6M4 INGX-201ENST00000359239 846 ntBASIC18.95■□□□□ 0.62
CSNK1G3Q9Y6M4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
CSNK1G3Q9Y6M4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1G3Q9Y6M4 NTF6B-201ENST00000591913 560 ntBASIC18.95■□□□□ 0.62
CSNK1G3Q9Y6M4 AC006011.2-201ENST00000621313 1158 ntBASIC18.95■□□□□ 0.62
CSNK1G3Q9Y6M4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1G3Q9Y6M4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1G3Q9Y6M4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1G3Q9Y6M4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.95■□□□□ 0.62
CSNK1G3Q9Y6M4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.94■□□□□ 0.62
CSNK1G3Q9Y6M4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G3Q9Y6M4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G3Q9Y6M4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.94■□□□□ 0.62
CSNK1G3Q9Y6M4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.94■□□□□ 0.62
CSNK1G3Q9Y6M4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G3Q9Y6M4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G3Q9Y6M4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.94■□□□□ 0.62
CSNK1G3Q9Y6M4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.94■□□□□ 0.62
CSNK1G3Q9Y6M4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G3Q9Y6M4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CSNK1G3Q9Y6M4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.94■□□□□ 0.62
CSNK1G3Q9Y6M4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G3Q9Y6M4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G3Q9Y6M4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G3Q9Y6M4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G3Q9Y6M4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G3Q9Y6M4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G3Q9Y6M4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.94■□□□□ 0.62
CSNK1G3Q9Y6M4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G3Q9Y6M4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CSNK1G3Q9Y6M4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CSNK1G3Q9Y6M4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms