Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.11■□□□□ 0.65
PCDHGA4Q9Y5G9 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDHGA4Q9Y5G9 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA4Q9Y5G9 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PCDHGA4Q9Y5G9 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDHGA4Q9Y5G9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA4Q9Y5G9 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PCDHGA4Q9Y5G9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHGA4Q9Y5G9 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
PCDHGA4Q9Y5G9 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PCDHGA4Q9Y5G9 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA4Q9Y5G9 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.11■□□□□ 0.65
PCDHGA4Q9Y5G9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA4Q9Y5G9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA4Q9Y5G9 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHGA4Q9Y5G9 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDHGA4Q9Y5G9 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA4Q9Y5G9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA4Q9Y5G9 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA4Q9Y5G9 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA4Q9Y5G9 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA4Q9Y5G9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PCDHGA4Q9Y5G9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDHGA4Q9Y5G9 RCN1P1-201ENST00000400413 996 ntBASIC19.1■□□□□ 0.65
PCDHGA4Q9Y5G9 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA4Q9Y5G9 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHGA4Q9Y5G9 AL355075.4-201ENST00000554988 638 ntBASIC19.1■□□□□ 0.65
PCDHGA4Q9Y5G9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDHGA4Q9Y5G9 RARRES2P10-201ENST00000564312 460 ntBASIC19.1■□□□□ 0.65
PCDHGA4Q9Y5G9 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PCDHGA4Q9Y5G9 AC012306.2-201ENST00000609350 630 ntBASIC19.1■□□□□ 0.65
PCDHGA4Q9Y5G9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA4Q9Y5G9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA4Q9Y5G9 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHGA4Q9Y5G9 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA4Q9Y5G9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 KRT16P6-202ENST00000425692 1426 ntBASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA4Q9Y5G9 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.08■□□□□ 0.65
PCDHGA4Q9Y5G9 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGA4Q9Y5G9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGA4Q9Y5G9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
PCDHGA4Q9Y5G9 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.08■□□□□ 0.65
PCDHGA4Q9Y5G9 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGA4Q9Y5G9 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGA4Q9Y5G9 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA4Q9Y5G9 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.08■□□□□ 0.64
PCDHGA4Q9Y5G9 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.08■□□□□ 0.64
PCDHGA4Q9Y5G9 AKR1B10P2-201ENST00000577332 927 ntBASIC19.08■□□□□ 0.64
PCDHGA4Q9Y5G9 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PCDHGA4Q9Y5G9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA4Q9Y5G9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHGA4Q9Y5G9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA4Q9Y5G9 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA4Q9Y5G9 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PCDHGA4Q9Y5G9 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.08■□□□□ 0.64
PCDHGA4Q9Y5G9 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHGA4Q9Y5G9 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHGA4Q9Y5G9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA4Q9Y5G9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA4Q9Y5G9 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA4Q9Y5G9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA4Q9Y5G9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA4Q9Y5G9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA4Q9Y5G9 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
PCDHGA4Q9Y5G9 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PCDHGA4Q9Y5G9 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA4Q9Y5G9 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.07■□□□□ 0.64
PCDHGA4Q9Y5G9 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGA4Q9Y5G9 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA4Q9Y5G9 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms