Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB4Q9UN71 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB4Q9UN71 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB4Q9UN71 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB4Q9UN71 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB4Q9UN71 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.75■□□□□ 0.59
PCDHGB4Q9UN71 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.75■□□□□ 0.59
PCDHGB4Q9UN71 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB4Q9UN71 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB4Q9UN71 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB4Q9UN71 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB4Q9UN71 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PCDHGB4Q9UN71 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PCDHGB4Q9UN71 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB4Q9UN71 AL133373.2-201ENST00000623187 2828 ntBASIC18.75■□□□□ 0.59
PCDHGB4Q9UN71 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGB4Q9UN71 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHGB4Q9UN71 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB4Q9UN71 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.75■□□□□ 0.59
PCDHGB4Q9UN71 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGB4Q9UN71 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB4Q9UN71 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PCDHGB4Q9UN71 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGB4Q9UN71 AL512625.2-201ENST00000417533 625 ntBASIC18.75■□□□□ 0.59
PCDHGB4Q9UN71 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB4Q9UN71 C2orf69P4-201ENST00000565394 541 ntBASIC18.75■□□□□ 0.59
PCDHGB4Q9UN71 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.75■□□□□ 0.59
PCDHGB4Q9UN71 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB4Q9UN71 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHGB4Q9UN71 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 AL138781.2-201ENST00000617896 1843 ntBASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGB4Q9UN71 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB4Q9UN71 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB4Q9UN71 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PCDHGB4Q9UN71 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PCDHGB4Q9UN71 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB4Q9UN71 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB4Q9UN71 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB4Q9UN71 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB4Q9UN71 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB4Q9UN71 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB4Q9UN71 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHGB4Q9UN71 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB4Q9UN71 PCDHB18P-201ENST00000524813 2368 ntBASIC18.73■□□□□ 0.59
PCDHGB4Q9UN71 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB4Q9UN71 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDHGB4Q9UN71 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PCDHGB4Q9UN71 AC023632.3-201ENST00000521633 145 ntBASIC18.73■□□□□ 0.59
PCDHGB4Q9UN71 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDHGB4Q9UN71 AC005181.1-201ENST00000604782 1256 ntBASIC18.73■□□□□ 0.59
PCDHGB4Q9UN71 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB4Q9UN71 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHGB4Q9UN71 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB4Q9UN71 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB4Q9UN71 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB4Q9UN71 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PCDHGB4Q9UN71 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB4Q9UN71 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB4Q9UN71 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB4Q9UN71 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB4Q9UN71 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB4Q9UN71 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PCDHGB4Q9UN71 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHGB4Q9UN71 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB4Q9UN71 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB4Q9UN71 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB4Q9UN71 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB4Q9UN71 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB4Q9UN71 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB4Q9UN71 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms