Protein–RNA interactions for Protein: Q9UBU9

NXF1, Nuclear RNA export factor 1, humanhuman

Known RBP Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1Q9UBU9 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NXF1Q9UBU9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.85■□□□□ 0.93
NXF1Q9UBU9 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NXF1Q9UBU9 LINC01465-201ENST00000408887 1940 ntBASIC20.85■□□□□ 0.93
NXF1Q9UBU9 NIFKP9-201ENST00000419265 221 ntBASIC20.85■□□□□ 0.93
NXF1Q9UBU9 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.85■□□□□ 0.93
NXF1Q9UBU9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
NXF1Q9UBU9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NXF1Q9UBU9 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NXF1Q9UBU9 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NXF1Q9UBU9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NXF1Q9UBU9 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NXF1Q9UBU9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NXF1Q9UBU9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
NXF1Q9UBU9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NXF1Q9UBU9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NXF1Q9UBU9 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.84■□□□□ 0.93
NXF1Q9UBU9 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.84■□□□□ 0.93
NXF1Q9UBU9 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.84■□□□□ 0.93
NXF1Q9UBU9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.84■□□□□ 0.93
NXF1Q9UBU9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NXF1Q9UBU9 FAM197Y1-201ENST00000421178 764 ntBASIC20.84■□□□□ 0.93
NXF1Q9UBU9 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.84■□□□□ 0.93
NXF1Q9UBU9 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.84■□□□□ 0.93
NXF1Q9UBU9 AL353708.3-201ENST00000610272 989 ntBASIC20.84■□□□□ 0.93
NXF1Q9UBU9 CR392000.1-201ENST00000624770 1228 ntBASIC20.84■□□□□ 0.93
NXF1Q9UBU9 HLA-A-209ENST00000638375 975 ntBASIC20.84■□□□□ 0.93
NXF1Q9UBU9 AL049637.2-201ENST00000641778 930 ntBASIC20.84■□□□□ 0.93
NXF1Q9UBU9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NXF1Q9UBU9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.84■□□□□ 0.93
NXF1Q9UBU9 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.84■□□□□ 0.93
NXF1Q9UBU9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.84■□□□□ 0.93
NXF1Q9UBU9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
NXF1Q9UBU9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
NXF1Q9UBU9 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NXF1Q9UBU9 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
NXF1Q9UBU9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
NXF1Q9UBU9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NXF1Q9UBU9 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NXF1Q9UBU9 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NXF1Q9UBU9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
NXF1Q9UBU9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
NXF1Q9UBU9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.83■□□□□ 0.93
NXF1Q9UBU9 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
NXF1Q9UBU9 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.83■□□□□ 0.93
NXF1Q9UBU9 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.83■□□□□ 0.93
NXF1Q9UBU9 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.83■□□□□ 0.93
NXF1Q9UBU9 AC073195.1-201ENST00000607241 877 ntBASIC20.83■□□□□ 0.93
NXF1Q9UBU9 AC113410.3-201ENST00000623366 203 ntBASIC20.83■□□□□ 0.93
NXF1Q9UBU9 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NXF1Q9UBU9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NXF1Q9UBU9 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NXF1Q9UBU9 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NXF1Q9UBU9 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
NXF1Q9UBU9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
NXF1Q9UBU9 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NXF1Q9UBU9 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.83■□□□□ 0.92
NXF1Q9UBU9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NXF1Q9UBU9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
NXF1Q9UBU9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NXF1Q9UBU9 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.82■□□□□ 0.92
NXF1Q9UBU9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.82■□□□□ 0.92
NXF1Q9UBU9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NXF1Q9UBU9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
NXF1Q9UBU9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.82■□□□□ 0.92
NXF1Q9UBU9 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NXF1Q9UBU9 KSR1P1-201ENST00000446298 240 ntBASIC20.82■□□□□ 0.92
NXF1Q9UBU9 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NXF1Q9UBU9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.82■□□□□ 0.92
NXF1Q9UBU9 AP001412.1-201ENST00000608405 714 ntBASIC20.82■□□□□ 0.92
NXF1Q9UBU9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.82■□□□□ 0.92
NXF1Q9UBU9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NXF1Q9UBU9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NXF1Q9UBU9 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NXF1Q9UBU9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
NXF1Q9UBU9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NXF1Q9UBU9 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.82■□□□□ 0.92
NXF1Q9UBU9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.81■□□□□ 0.92
NXF1Q9UBU9 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NXF1Q9UBU9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
NXF1Q9UBU9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NXF1Q9UBU9 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NXF1Q9UBU9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
NXF1Q9UBU9 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NXF1Q9UBU9 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NXF1Q9UBU9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NXF1Q9UBU9 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.81■□□□□ 0.92
NXF1Q9UBU9 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
NXF1Q9UBU9 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
NXF1Q9UBU9 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.81■□□□□ 0.92
NXF1Q9UBU9 CD177P1-201ENST00000606252 935 ntBASIC20.81■□□□□ 0.92
NXF1Q9UBU9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.81■□□□□ 0.92
NXF1Q9UBU9 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.81■□□□□ 0.92
NXF1Q9UBU9 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.81■□□□□ 0.92
NXF1Q9UBU9 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NXF1Q9UBU9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NXF1Q9UBU9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NXF1Q9UBU9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NXF1Q9UBU9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NXF1Q9UBU9 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms