Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMARCAL1Q9NZC9 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMARCAL1Q9NZC9 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMARCAL1Q9NZC9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMARCAL1Q9NZC9 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMARCAL1Q9NZC9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMARCAL1Q9NZC9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMARCAL1Q9NZC9 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.4■□□□□ 0.86
SMARCAL1Q9NZC9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMARCAL1Q9NZC9 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SMARCAL1Q9NZC9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.4■□□□□ 0.86
SMARCAL1Q9NZC9 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.4■□□□□ 0.86
SMARCAL1Q9NZC9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMARCAL1Q9NZC9 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.4■□□□□ 0.86
SMARCAL1Q9NZC9 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.4■□□□□ 0.86
SMARCAL1Q9NZC9 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMARCAL1Q9NZC9 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.39■□□□□ 0.86
SMARCAL1Q9NZC9 WIZP1-201ENST00000531444 2299 ntBASIC20.39■□□□□ 0.86
SMARCAL1Q9NZC9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.39■□□□□ 0.86
SMARCAL1Q9NZC9 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SMARCAL1Q9NZC9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.39■□□□□ 0.86
SMARCAL1Q9NZC9 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.39■□□□□ 0.86
SMARCAL1Q9NZC9 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
SMARCAL1Q9NZC9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMARCAL1Q9NZC9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
SMARCAL1Q9NZC9 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.39■□□□□ 0.86
SMARCAL1Q9NZC9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.39■□□□□ 0.86
SMARCAL1Q9NZC9 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.39■□□□□ 0.86
SMARCAL1Q9NZC9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.39■□□□□ 0.85
SMARCAL1Q9NZC9 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCAL1Q9NZC9 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCAL1Q9NZC9 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.39■□□□□ 0.85
SMARCAL1Q9NZC9 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCAL1Q9NZC9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.39■□□□□ 0.85
SMARCAL1Q9NZC9 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.39■□□□□ 0.85
SMARCAL1Q9NZC9 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCAL1Q9NZC9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.39■□□□□ 0.85
SMARCAL1Q9NZC9 AC080038.1-201ENST00000611274 1154 ntBASIC20.39■□□□□ 0.85
SMARCAL1Q9NZC9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SMARCAL1Q9NZC9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCAL1Q9NZC9 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCAL1Q9NZC9 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.39■□□□□ 0.85
SMARCAL1Q9NZC9 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.39■□□□□ 0.85
SMARCAL1Q9NZC9 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCAL1Q9NZC9 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCAL1Q9NZC9 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCAL1Q9NZC9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SMARCAL1Q9NZC9 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCAL1Q9NZC9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCAL1Q9NZC9 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.39■□□□□ 0.85
SMARCAL1Q9NZC9 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.38■□□□□ 0.85
SMARCAL1Q9NZC9 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.38■□□□□ 0.85
SMARCAL1Q9NZC9 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.38■□□□□ 0.85
SMARCAL1Q9NZC9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SMARCAL1Q9NZC9 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCAL1Q9NZC9 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCAL1Q9NZC9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SMARCAL1Q9NZC9 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.38■□□□□ 0.85
SMARCAL1Q9NZC9 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SMARCAL1Q9NZC9 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCAL1Q9NZC9 AC023632.3-201ENST00000521633 145 ntBASIC20.38■□□□□ 0.85
SMARCAL1Q9NZC9 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.38■□□□□ 0.85
SMARCAL1Q9NZC9 AC092666.2-201ENST00000613287 246 ntBASIC20.38■□□□□ 0.85
SMARCAL1Q9NZC9 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.38■□□□□ 0.85
SMARCAL1Q9NZC9 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SMARCAL1Q9NZC9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCAL1Q9NZC9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SMARCAL1Q9NZC9 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCAL1Q9NZC9 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.38■□□□□ 0.85
SMARCAL1Q9NZC9 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.37■□□□□ 0.85
SMARCAL1Q9NZC9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCAL1Q9NZC9 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCAL1Q9NZC9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.37■□□□□ 0.85
SMARCAL1Q9NZC9 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCAL1Q9NZC9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCAL1Q9NZC9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.37■□□□□ 0.85
SMARCAL1Q9NZC9 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SMARCAL1Q9NZC9 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCAL1Q9NZC9 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCAL1Q9NZC9 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCAL1Q9NZC9 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCAL1Q9NZC9 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.37■□□□□ 0.85
SMARCAL1Q9NZC9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCAL1Q9NZC9 AC007322.1-201ENST00000426983 750 ntBASIC20.37■□□□□ 0.85
SMARCAL1Q9NZC9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.37■□□□□ 0.85
SMARCAL1Q9NZC9 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCAL1Q9NZC9 AC231657.2-201ENST00000624556 255 ntBASIC20.37■□□□□ 0.85
SMARCAL1Q9NZC9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SMARCAL1Q9NZC9 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCAL1Q9NZC9 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.37■□□□□ 0.85
SMARCAL1Q9NZC9 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.37■□□□□ 0.85
SMARCAL1Q9NZC9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCAL1Q9NZC9 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCAL1Q9NZC9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCAL1Q9NZC9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SMARCAL1Q9NZC9 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCAL1Q9NZC9 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SMARCAL1Q9NZC9 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCAL1Q9NZC9 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.36■□□□□ 0.85
SMARCAL1Q9NZC9 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms