Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PARPBPQ9NWS1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PARPBPQ9NWS1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PARPBPQ9NWS1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.34■□□□□ 0.37
PARPBPQ9NWS1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PARPBPQ9NWS1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PARPBPQ9NWS1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.34■□□□□ 0.37
PARPBPQ9NWS1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PARPBPQ9NWS1 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PARPBPQ9NWS1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PARPBPQ9NWS1 KRT8P8-201ENST00000434750 1448 ntBASIC17.34■□□□□ 0.37
PARPBPQ9NWS1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PARPBPQ9NWS1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.34■□□□□ 0.37
PARPBPQ9NWS1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.34■□□□□ 0.37
PARPBPQ9NWS1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.34■□□□□ 0.37
PARPBPQ9NWS1 RARRES2P10-201ENST00000564312 460 ntBASIC17.34■□□□□ 0.37
PARPBPQ9NWS1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.34■□□□□ 0.37
PARPBPQ9NWS1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PARPBPQ9NWS1 AP001412.1-201ENST00000608405 714 ntBASIC17.34■□□□□ 0.37
PARPBPQ9NWS1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PARPBPQ9NWS1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PARPBPQ9NWS1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
PARPBPQ9NWS1 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PARPBPQ9NWS1 PCDHAC2-203ENST00000615316 3011 ntBASIC17.34■□□□□ 0.37
PARPBPQ9NWS1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PARPBPQ9NWS1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PARPBPQ9NWS1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PARPBPQ9NWS1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.33■□□□□ 0.37
PARPBPQ9NWS1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PARPBPQ9NWS1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PARPBPQ9NWS1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
PARPBPQ9NWS1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PARPBPQ9NWS1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PARPBPQ9NWS1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.33■□□□□ 0.36
PARPBPQ9NWS1 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PARPBPQ9NWS1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PARPBPQ9NWS1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.33■□□□□ 0.36
PARPBPQ9NWS1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.33■□□□□ 0.36
PARPBPQ9NWS1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PARPBPQ9NWS1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.33■□□□□ 0.36
PARPBPQ9NWS1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.33■□□□□ 0.36
PARPBPQ9NWS1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.33■□□□□ 0.36
PARPBPQ9NWS1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PARPBPQ9NWS1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
PARPBPQ9NWS1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.33■□□□□ 0.36
PARPBPQ9NWS1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PARPBPQ9NWS1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PARPBPQ9NWS1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PARPBPQ9NWS1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
PARPBPQ9NWS1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.32■□□□□ 0.36
PARPBPQ9NWS1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PARPBPQ9NWS1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.32■□□□□ 0.36
PARPBPQ9NWS1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.32■□□□□ 0.36
PARPBPQ9NWS1 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.32■□□□□ 0.36
PARPBPQ9NWS1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PARPBPQ9NWS1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PARPBPQ9NWS1 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PARPBPQ9NWS1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PARPBPQ9NWS1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PARPBPQ9NWS1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PARPBPQ9NWS1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.32■□□□□ 0.36
PARPBPQ9NWS1 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.32■□□□□ 0.36
PARPBPQ9NWS1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PARPBPQ9NWS1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
PARPBPQ9NWS1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PARPBPQ9NWS1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PARPBPQ9NWS1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.32■□□□□ 0.36
PARPBPQ9NWS1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PARPBPQ9NWS1 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
PARPBPQ9NWS1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PARPBPQ9NWS1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PARPBPQ9NWS1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
PARPBPQ9NWS1 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PARPBPQ9NWS1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PARPBPQ9NWS1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.31■□□□□ 0.36
PARPBPQ9NWS1 MIR718-201ENST00000390190 70 ntBASIC17.31■□□□□ 0.36
PARPBPQ9NWS1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PARPBPQ9NWS1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PARPBPQ9NWS1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.31■□□□□ 0.36
PARPBPQ9NWS1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.31■□□□□ 0.36
PARPBPQ9NWS1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PARPBPQ9NWS1 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PARPBPQ9NWS1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.31■□□□□ 0.36
PARPBPQ9NWS1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PARPBPQ9NWS1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PARPBPQ9NWS1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PARPBPQ9NWS1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PARPBPQ9NWS1 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PARPBPQ9NWS1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.31■□□□□ 0.36
PARPBPQ9NWS1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PARPBPQ9NWS1 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PARPBPQ9NWS1 HTR7P1-201ENST00000538670 1336 ntBASIC17.3■□□□□ 0.36
PARPBPQ9NWS1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.3■□□□□ 0.36
PARPBPQ9NWS1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PARPBPQ9NWS1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PARPBPQ9NWS1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PARPBPQ9NWS1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PARPBPQ9NWS1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PARPBPQ9NWS1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PARPBPQ9NWS1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms