Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CCM2LQ9NUG4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCM2LQ9NUG4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.42■□□□□ 0.54
CCM2LQ9NUG4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCM2LQ9NUG4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.42■□□□□ 0.54
CCM2LQ9NUG4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.42■□□□□ 0.54
CCM2LQ9NUG4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CCM2LQ9NUG4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.42■□□□□ 0.54
CCM2LQ9NUG4 SLC7A5P1-201ENST00000568957 537 ntBASIC18.42■□□□□ 0.54
CCM2LQ9NUG4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CCM2LQ9NUG4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.42■□□□□ 0.54
CCM2LQ9NUG4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.42■□□□□ 0.54
CCM2LQ9NUG4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CCM2LQ9NUG4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCM2LQ9NUG4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCM2LQ9NUG4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCM2LQ9NUG4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
CCM2LQ9NUG4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCM2LQ9NUG4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCM2LQ9NUG4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCM2LQ9NUG4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCM2LQ9NUG4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CCM2LQ9NUG4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.42■□□□□ 0.54
CCM2LQ9NUG4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCM2LQ9NUG4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCM2LQ9NUG4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CCM2LQ9NUG4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 RPS2P52-201ENST00000469610 820 ntBASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 MIR4758-201ENST00000577688 71 ntBASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCM2LQ9NUG4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCM2LQ9NUG4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCM2LQ9NUG4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCM2LQ9NUG4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCM2LQ9NUG4 AC090164.3-201ENST00000610780 2143 ntBASIC18.4■□□□□ 0.54
CCM2LQ9NUG4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCM2LQ9NUG4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCM2LQ9NUG4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.4■□□□□ 0.54
CCM2LQ9NUG4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CCM2LQ9NUG4 CNN2P6-201ENST00000439038 900 ntBASIC18.4■□□□□ 0.54
CCM2LQ9NUG4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCM2LQ9NUG4 AL031963.3-201ENST00000606441 850 ntBASIC18.4■□□□□ 0.54
CCM2LQ9NUG4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.4■□□□□ 0.54
CCM2LQ9NUG4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.4■□□□□ 0.54
CCM2LQ9NUG4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.4■□□□□ 0.54
CCM2LQ9NUG4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.4■□□□□ 0.54
CCM2LQ9NUG4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.4■□□□□ 0.54
CCM2LQ9NUG4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCM2LQ9NUG4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.4■□□□□ 0.54
CCM2LQ9NUG4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CCM2LQ9NUG4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.39■□□□□ 0.54
CCM2LQ9NUG4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCM2LQ9NUG4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.39■□□□□ 0.54
CCM2LQ9NUG4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCM2LQ9NUG4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCM2LQ9NUG4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCM2LQ9NUG4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.39■□□□□ 0.53
CCM2LQ9NUG4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCM2LQ9NUG4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.39■□□□□ 0.53
CCM2LQ9NUG4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.39■□□□□ 0.53
CCM2LQ9NUG4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCM2LQ9NUG4 AP006294.2-201ENST00000641667 209 ntBASIC18.39■□□□□ 0.53
CCM2LQ9NUG4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCM2LQ9NUG4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCM2LQ9NUG4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCM2LQ9NUG4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCM2LQ9NUG4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms