Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
ECHDC1Q9NTX5 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
ECHDC1Q9NTX5 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
ECHDC1Q9NTX5 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
ECHDC1Q9NTX5 KSR1P1-201ENST00000446298 240 ntBASIC23.65■■□□□ 1.38
ECHDC1Q9NTX5 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
ECHDC1Q9NTX5 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC23.65■■□□□ 1.38
ECHDC1Q9NTX5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC23.65■■□□□ 1.38
ECHDC1Q9NTX5 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC23.65■■□□□ 1.38
ECHDC1Q9NTX5 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC23.65■■□□□ 1.38
ECHDC1Q9NTX5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
ECHDC1Q9NTX5 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC23.65■■□□□ 1.38
ECHDC1Q9NTX5 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
ECHDC1Q9NTX5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
ECHDC1Q9NTX5 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
ECHDC1Q9NTX5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
ECHDC1Q9NTX5 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
ECHDC1Q9NTX5 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
ECHDC1Q9NTX5 RPS2P55-201ENST00000397318 883 ntBASIC23.64■■□□□ 1.37
ECHDC1Q9NTX5 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
ECHDC1Q9NTX5 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
ECHDC1Q9NTX5 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.64■■□□□ 1.37
ECHDC1Q9NTX5 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
ECHDC1Q9NTX5 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
ECHDC1Q9NTX5 AC107956.1-201ENST00000494359 873 ntBASIC23.64■■□□□ 1.37
ECHDC1Q9NTX5 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC23.64■■□□□ 1.37
ECHDC1Q9NTX5 AL160286.2-201ENST00000567150 934 ntBASIC23.64■■□□□ 1.37
ECHDC1Q9NTX5 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC23.64■■□□□ 1.37
ECHDC1Q9NTX5 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
ECHDC1Q9NTX5 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC23.64■■□□□ 1.37
ECHDC1Q9NTX5 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC23.64■■□□□ 1.37
ECHDC1Q9NTX5 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
ECHDC1Q9NTX5 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC23.64■■□□□ 1.37
ECHDC1Q9NTX5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
ECHDC1Q9NTX5 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
ECHDC1Q9NTX5 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
ECHDC1Q9NTX5 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
ECHDC1Q9NTX5 AC005332.7-201ENST00000614046 2005 ntBASIC23.64■■□□□ 1.37
ECHDC1Q9NTX5 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
ECHDC1Q9NTX5 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC23.64■■□□□ 1.37
ECHDC1Q9NTX5 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ECHDC1Q9NTX5 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ECHDC1Q9NTX5 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
ECHDC1Q9NTX5 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
ECHDC1Q9NTX5 SAPCD2P4-201ENST00000424595 1171 ntBASIC23.63■■□□□ 1.37
ECHDC1Q9NTX5 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
ECHDC1Q9NTX5 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
ECHDC1Q9NTX5 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC23.63■■□□□ 1.37
ECHDC1Q9NTX5 AC233702.5-201ENST00000584107 538 ntBASIC23.63■■□□□ 1.37
ECHDC1Q9NTX5 RPS15-203ENST00000586096 570 ntTSL 2 BASIC23.63■■□□□ 1.37
ECHDC1Q9NTX5 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ECHDC1Q9NTX5 Z99916.2-201ENST00000604037 246 ntBASIC23.63■■□□□ 1.37
ECHDC1Q9NTX5 AC073195.1-201ENST00000607241 877 ntBASIC23.63■■□□□ 1.37
ECHDC1Q9NTX5 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC23.63■■□□□ 1.37
ECHDC1Q9NTX5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
ECHDC1Q9NTX5 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
ECHDC1Q9NTX5 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
ECHDC1Q9NTX5 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ECHDC1Q9NTX5 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC23.62■■□□□ 1.37
ECHDC1Q9NTX5 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ECHDC1Q9NTX5 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC23.62■■□□□ 1.37
ECHDC1Q9NTX5 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
ECHDC1Q9NTX5 AC012618.2-201ENST00000428058 849 ntBASIC23.62■■□□□ 1.37
ECHDC1Q9NTX5 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
ECHDC1Q9NTX5 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.62■■□□□ 1.37
ECHDC1Q9NTX5 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
ECHDC1Q9NTX5 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
ECHDC1Q9NTX5 AL032819.2-201ENST00000624543 2162 ntBASIC23.62■■□□□ 1.37
ECHDC1Q9NTX5 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC23.62■■□□□ 1.37
ECHDC1Q9NTX5 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
ECHDC1Q9NTX5 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
ECHDC1Q9NTX5 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC23.61■■□□□ 1.37
ECHDC1Q9NTX5 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
ECHDC1Q9NTX5 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC23.61■■□□□ 1.37
ECHDC1Q9NTX5 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
ECHDC1Q9NTX5 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC23.61■■□□□ 1.37
ECHDC1Q9NTX5 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
ECHDC1Q9NTX5 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
ECHDC1Q9NTX5 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
ECHDC1Q9NTX5 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
ECHDC1Q9NTX5 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
ECHDC1Q9NTX5 AC004980.1-204ENST00000429707 299 ntBASIC23.61■■□□□ 1.37
ECHDC1Q9NTX5 AC008550.1-201ENST00000511500 884 ntBASIC23.61■■□□□ 1.37
ECHDC1Q9NTX5 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
ECHDC1Q9NTX5 REXO2-216ENST00000544196 452 ntTSL 3 BASIC23.61■■□□□ 1.37
ECHDC1Q9NTX5 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
ECHDC1Q9NTX5 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
ECHDC1Q9NTX5 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
ECHDC1Q9NTX5 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
ECHDC1Q9NTX5 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
ECHDC1Q9NTX5 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC23.61■■□□□ 1.37
ECHDC1Q9NTX5 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC23.6■■□□□ 1.37
ECHDC1Q9NTX5 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC23.6■■□□□ 1.37
ECHDC1Q9NTX5 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC23.6■■□□□ 1.37
ECHDC1Q9NTX5 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
ECHDC1Q9NTX5 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
ECHDC1Q9NTX5 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC23.6■■□□□ 1.37
ECHDC1Q9NTX5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
ECHDC1Q9NTX5 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
ECHDC1Q9NTX5 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms