Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
HINT3Q9NQE9 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.5■□□□□ 0.39
HINT3Q9NQE9 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.5■□□□□ 0.39
HINT3Q9NQE9 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
HINT3Q9NQE9 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
HINT3Q9NQE9 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HINT3Q9NQE9 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
HINT3Q9NQE9 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HINT3Q9NQE9 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HINT3Q9NQE9 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HINT3Q9NQE9 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HINT3Q9NQE9 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HINT3Q9NQE9 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HINT3Q9NQE9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HINT3Q9NQE9 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HINT3Q9NQE9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
HINT3Q9NQE9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HINT3Q9NQE9 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HINT3Q9NQE9 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HINT3Q9NQE9 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HINT3Q9NQE9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HINT3Q9NQE9 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HINT3Q9NQE9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HINT3Q9NQE9 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HINT3Q9NQE9 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.49■□□□□ 0.39
HINT3Q9NQE9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.49■□□□□ 0.39
HINT3Q9NQE9 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.49■□□□□ 0.39
HINT3Q9NQE9 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.49■□□□□ 0.39
HINT3Q9NQE9 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
HINT3Q9NQE9 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HINT3Q9NQE9 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HINT3Q9NQE9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HINT3Q9NQE9 AC006333.2-201ENST00000607957 2099 ntBASIC17.49■□□□□ 0.39
HINT3Q9NQE9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
HINT3Q9NQE9 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HINT3Q9NQE9 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
HINT3Q9NQE9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HINT3Q9NQE9 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HINT3Q9NQE9 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.49■□□□□ 0.39
HINT3Q9NQE9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HINT3Q9NQE9 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.48■□□□□ 0.39
HINT3Q9NQE9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HINT3Q9NQE9 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HINT3Q9NQE9 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
HINT3Q9NQE9 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HINT3Q9NQE9 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.48■□□□□ 0.39
HINT3Q9NQE9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HINT3Q9NQE9 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HINT3Q9NQE9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.48■□□□□ 0.39
HINT3Q9NQE9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HINT3Q9NQE9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HINT3Q9NQE9 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.48■□□□□ 0.39
HINT3Q9NQE9 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HINT3Q9NQE9 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.48■□□□□ 0.39
HINT3Q9NQE9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HINT3Q9NQE9 AC098934.4-201ENST00000564127 592 ntBASIC17.48■□□□□ 0.39
HINT3Q9NQE9 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HINT3Q9NQE9 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
HINT3Q9NQE9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HINT3Q9NQE9 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.48■□□□□ 0.39
HINT3Q9NQE9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HINT3Q9NQE9 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.48■□□□□ 0.39
HINT3Q9NQE9 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.48■□□□□ 0.39
HINT3Q9NQE9 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
HINT3Q9NQE9 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HINT3Q9NQE9 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HINT3Q9NQE9 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HINT3Q9NQE9 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.48■□□□□ 0.39
HINT3Q9NQE9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HINT3Q9NQE9 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HINT3Q9NQE9 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.47■□□□□ 0.39
HINT3Q9NQE9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 TFP1-202ENST00000475455 1573 ntBASIC17.47■□□□□ 0.39
HINT3Q9NQE9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms