Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C12orf4Q9NQ89 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.8■□□□□ 0.28
C12orf4Q9NQ89 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C12orf4Q9NQ89 CYP21A1P-202ENST00000354927 1481 ntBASIC16.8■□□□□ 0.28
C12orf4Q9NQ89 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C12orf4Q9NQ89 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C12orf4Q9NQ89 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C12orf4Q9NQ89 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
C12orf4Q9NQ89 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C12orf4Q9NQ89 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.8■□□□□ 0.28
C12orf4Q9NQ89 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
C12orf4Q9NQ89 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.8■□□□□ 0.28
C12orf4Q9NQ89 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
C12orf4Q9NQ89 AL591742.1-201ENST00000604433 565 ntBASIC16.8■□□□□ 0.28
C12orf4Q9NQ89 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C12orf4Q9NQ89 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
C12orf4Q9NQ89 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
C12orf4Q9NQ89 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C12orf4Q9NQ89 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C12orf4Q9NQ89 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.8■□□□□ 0.28
C12orf4Q9NQ89 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
C12orf4Q9NQ89 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.8■□□□□ 0.28
C12orf4Q9NQ89 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.8■□□□□ 0.28
C12orf4Q9NQ89 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C12orf4Q9NQ89 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
C12orf4Q9NQ89 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C12orf4Q9NQ89 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf4Q9NQ89 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf4Q9NQ89 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf4Q9NQ89 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.79■□□□□ 0.28
C12orf4Q9NQ89 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.79■□□□□ 0.28
C12orf4Q9NQ89 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf4Q9NQ89 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf4Q9NQ89 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.79■□□□□ 0.28
C12orf4Q9NQ89 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
C12orf4Q9NQ89 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.79■□□□□ 0.28
C12orf4Q9NQ89 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf4Q9NQ89 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
C12orf4Q9NQ89 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.79■□□□□ 0.28
C12orf4Q9NQ89 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.79■□□□□ 0.28
C12orf4Q9NQ89 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.79■□□□□ 0.28
C12orf4Q9NQ89 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.79■□□□□ 0.28
C12orf4Q9NQ89 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.79■□□□□ 0.28
C12orf4Q9NQ89 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.79■□□□□ 0.28
C12orf4Q9NQ89 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf4Q9NQ89 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf4Q9NQ89 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
C12orf4Q9NQ89 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
C12orf4Q9NQ89 AL391005.1-201ENST00000623953 2435 ntBASIC16.79■□□□□ 0.28
C12orf4Q9NQ89 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf4Q9NQ89 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
C12orf4Q9NQ89 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
C12orf4Q9NQ89 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf4Q9NQ89 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf4Q9NQ89 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf4Q9NQ89 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf4Q9NQ89 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf4Q9NQ89 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.78■□□□□ 0.28
C12orf4Q9NQ89 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
C12orf4Q9NQ89 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf4Q9NQ89 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf4Q9NQ89 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf4Q9NQ89 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf4Q9NQ89 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf4Q9NQ89 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
C12orf4Q9NQ89 AL162412.1-201ENST00000567129 965 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms