Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
NLRC4Q9NPP4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
NLRC4Q9NPP4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21■□□□□ 0.95
NLRC4Q9NPP4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NLRC4Q9NPP4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
NLRC4Q9NPP4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NLRC4Q9NPP4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
NLRC4Q9NPP4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NLRC4Q9NPP4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NLRC4Q9NPP4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.99■□□□□ 0.95
NLRC4Q9NPP4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NLRC4Q9NPP4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.99■□□□□ 0.95
NLRC4Q9NPP4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.99■□□□□ 0.95
NLRC4Q9NPP4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.99■□□□□ 0.95
NLRC4Q9NPP4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NLRC4Q9NPP4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
NLRC4Q9NPP4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NLRC4Q9NPP4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.99■□□□□ 0.95
NLRC4Q9NPP4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NLRC4Q9NPP4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NLRC4Q9NPP4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
NLRC4Q9NPP4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NLRC4Q9NPP4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NLRC4Q9NPP4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NLRC4Q9NPP4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NLRC4Q9NPP4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.98■□□□□ 0.95
NLRC4Q9NPP4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NLRC4Q9NPP4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.98■□□□□ 0.95
NLRC4Q9NPP4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NLRC4Q9NPP4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NLRC4Q9NPP4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NLRC4Q9NPP4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.98■□□□□ 0.95
NLRC4Q9NPP4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.98■□□□□ 0.95
NLRC4Q9NPP4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NLRC4Q9NPP4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NLRC4Q9NPP4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NLRC4Q9NPP4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NLRC4Q9NPP4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
NLRC4Q9NPP4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NLRC4Q9NPP4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NLRC4Q9NPP4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NLRC4Q9NPP4 AP006587.1-201ENST00000534129 1502 ntBASIC20.98■□□□□ 0.95
NLRC4Q9NPP4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NLRC4Q9NPP4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NLRC4Q9NPP4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NLRC4Q9NPP4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NLRC4Q9NPP4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.97■□□□□ 0.95
NLRC4Q9NPP4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.97■□□□□ 0.95
NLRC4Q9NPP4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
NLRC4Q9NPP4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NLRC4Q9NPP4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NLRC4Q9NPP4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NLRC4Q9NPP4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.97■□□□□ 0.95
NLRC4Q9NPP4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.97■□□□□ 0.95
NLRC4Q9NPP4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NLRC4Q9NPP4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NLRC4Q9NPP4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
NLRC4Q9NPP4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NLRC4Q9NPP4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.97■□□□□ 0.95
NLRC4Q9NPP4 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.97■□□□□ 0.95
NLRC4Q9NPP4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.97■□□□□ 0.95
NLRC4Q9NPP4 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.97■□□□□ 0.95
NLRC4Q9NPP4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.97■□□□□ 0.95
NLRC4Q9NPP4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.97■□□□□ 0.95
NLRC4Q9NPP4 AL121906.2-201ENST00000621597 723 ntBASIC20.97■□□□□ 0.95
NLRC4Q9NPP4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NLRC4Q9NPP4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NLRC4Q9NPP4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NLRC4Q9NPP4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.97■□□□□ 0.95
NLRC4Q9NPP4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NLRC4Q9NPP4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.97■□□□□ 0.95
NLRC4Q9NPP4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NLRC4Q9NPP4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.97■□□□□ 0.95
NLRC4Q9NPP4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
NLRC4Q9NPP4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NLRC4Q9NPP4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.97■□□□□ 0.95
NLRC4Q9NPP4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NLRC4Q9NPP4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
NLRC4Q9NPP4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NLRC4Q9NPP4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NLRC4Q9NPP4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NLRC4Q9NPP4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
NLRC4Q9NPP4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NLRC4Q9NPP4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NLRC4Q9NPP4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NLRC4Q9NPP4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
NLRC4Q9NPP4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NLRC4Q9NPP4 AC120498.8-201ENST00000614275 531 ntBASIC20.96■□□□□ 0.95
NLRC4Q9NPP4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NLRC4Q9NPP4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NLRC4Q9NPP4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NLRC4Q9NPP4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
NLRC4Q9NPP4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NLRC4Q9NPP4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NLRC4Q9NPP4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.96■□□□□ 0.95
NLRC4Q9NPP4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NLRC4Q9NPP4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
NLRC4Q9NPP4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NLRC4Q9NPP4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NLRC4Q9NPP4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms