Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.64■■□□□ 1.06
CBX8Q9HC52 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CBX8Q9HC52 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CBX8Q9HC52 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CBX8Q9HC52 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CBX8Q9HC52 NTF6G-201ENST00000591094 616 ntBASIC21.64■■□□□ 1.05
CBX8Q9HC52 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CBX8Q9HC52 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.64■■□□□ 1.05
CBX8Q9HC52 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CBX8Q9HC52 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.64■■□□□ 1.05
CBX8Q9HC52 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CBX8Q9HC52 AL354751.1-201ENST00000412768 1863 ntBASIC21.64■■□□□ 1.05
CBX8Q9HC52 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.64■■□□□ 1.05
CBX8Q9HC52 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CBX8Q9HC52 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.64■■□□□ 1.05
CBX8Q9HC52 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.64■■□□□ 1.05
CBX8Q9HC52 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.64■■□□□ 1.05
CBX8Q9HC52 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CBX8Q9HC52 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CBX8Q9HC52 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.64■■□□□ 1.05
CBX8Q9HC52 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CBX8Q9HC52 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CBX8Q9HC52 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CBX8Q9HC52 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CBX8Q9HC52 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
CBX8Q9HC52 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CBX8Q9HC52 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC21.63■■□□□ 1.05
CBX8Q9HC52 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CBX8Q9HC52 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CBX8Q9HC52 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CBX8Q9HC52 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CBX8Q9HC52 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.63■■□□□ 1.05
CBX8Q9HC52 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CBX8Q9HC52 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CBX8Q9HC52 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CBX8Q9HC52 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CBX8Q9HC52 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CBX8Q9HC52 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CBX8Q9HC52 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CBX8Q9HC52 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.63■■□□□ 1.05
CBX8Q9HC52 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CBX8Q9HC52 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.63■■□□□ 1.05
CBX8Q9HC52 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CBX8Q9HC52 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CBX8Q9HC52 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CBX8Q9HC52 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CBX8Q9HC52 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.62■■□□□ 1.05
CBX8Q9HC52 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.62■■□□□ 1.05
CBX8Q9HC52 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CBX8Q9HC52 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CBX8Q9HC52 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CBX8Q9HC52 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.62■■□□□ 1.05
CBX8Q9HC52 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
CBX8Q9HC52 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.62■■□□□ 1.05
CBX8Q9HC52 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CBX8Q9HC52 PCDHB18P-201ENST00000524813 2368 ntBASIC21.62■■□□□ 1.05
CBX8Q9HC52 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CBX8Q9HC52 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CBX8Q9HC52 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CBX8Q9HC52 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
CBX8Q9HC52 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
CBX8Q9HC52 SDHAP1-207ENST00000440850 2000 ntBASIC21.62■■□□□ 1.05
CBX8Q9HC52 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CBX8Q9HC52 TFP1-202ENST00000475455 1573 ntBASIC21.61■■□□□ 1.05
CBX8Q9HC52 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CBX8Q9HC52 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CBX8Q9HC52 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CBX8Q9HC52 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CBX8Q9HC52 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.61■■□□□ 1.05
CBX8Q9HC52 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.61■■□□□ 1.05
CBX8Q9HC52 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.61■■□□□ 1.05
CBX8Q9HC52 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.61■■□□□ 1.05
CBX8Q9HC52 DUX4L16-201ENST00000555130 1264 ntBASIC21.61■■□□□ 1.05
CBX8Q9HC52 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.61■■□□□ 1.05
CBX8Q9HC52 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CBX8Q9HC52 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.61■■□□□ 1.05
CBX8Q9HC52 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CBX8Q9HC52 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CBX8Q9HC52 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CBX8Q9HC52 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.61■■□□□ 1.05
CBX8Q9HC52 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CBX8Q9HC52 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CBX8Q9HC52 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CBX8Q9HC52 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CBX8Q9HC52 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CBX8Q9HC52 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.6■■□□□ 1.05
CBX8Q9HC52 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC21.6■■□□□ 1.05
CBX8Q9HC52 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CBX8Q9HC52 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CBX8Q9HC52 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CBX8Q9HC52 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CBX8Q9HC52 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.6■■□□□ 1.05
CBX8Q9HC52 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.6■■□□□ 1.05
CBX8Q9HC52 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CBX8Q9HC52 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CBX8Q9HC52 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CBX8Q9HC52 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CBX8Q9HC52 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.6■■□□□ 1.05
CBX8Q9HC52 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CBX8Q9HC52 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms