Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PIF1Q9H611 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PIF1Q9H611 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.5■□□□□ 0.55
PIF1Q9H611 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
PIF1Q9H611 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PIF1Q9H611 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PIF1Q9H611 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PIF1Q9H611 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.49■□□□□ 0.55
PIF1Q9H611 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.49■□□□□ 0.55
PIF1Q9H611 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PIF1Q9H611 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PIF1Q9H611 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
PIF1Q9H611 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PIF1Q9H611 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PIF1Q9H611 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PIF1Q9H611 AL137784.2-201ENST00000607332 1000 ntBASIC18.49■□□□□ 0.55
PIF1Q9H611 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.49■□□□□ 0.55
PIF1Q9H611 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PIF1Q9H611 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PIF1Q9H611 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PIF1Q9H611 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PIF1Q9H611 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.49■□□□□ 0.55
PIF1Q9H611 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PIF1Q9H611 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PIF1Q9H611 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PIF1Q9H611 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PIF1Q9H611 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PIF1Q9H611 AC068338.2-201ENST00000563278 1430 ntBASIC18.49■□□□□ 0.55
PIF1Q9H611 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PIF1Q9H611 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.48■□□□□ 0.55
PIF1Q9H611 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PIF1Q9H611 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
PIF1Q9H611 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PIF1Q9H611 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PIF1Q9H611 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PIF1Q9H611 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.48■□□□□ 0.55
PIF1Q9H611 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PIF1Q9H611 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PIF1Q9H611 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PIF1Q9H611 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PIF1Q9H611 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PIF1Q9H611 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.48■□□□□ 0.55
PIF1Q9H611 AC011767.1-201ENST00000617410 1153 ntBASIC18.48■□□□□ 0.55
PIF1Q9H611 AC100791.3-201ENST00000617619 330 ntBASIC18.48■□□□□ 0.55
PIF1Q9H611 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PIF1Q9H611 CROCCP3-202ENST00000420820 1947 ntBASIC18.48■□□□□ 0.55
PIF1Q9H611 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.48■□□□□ 0.55
PIF1Q9H611 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PIF1Q9H611 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.48■□□□□ 0.55
PIF1Q9H611 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PIF1Q9H611 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PIF1Q9H611 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PIF1Q9H611 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PIF1Q9H611 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.48■□□□□ 0.55
PIF1Q9H611 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PIF1Q9H611 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PIF1Q9H611 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
PIF1Q9H611 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PIF1Q9H611 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PIF1Q9H611 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.47■□□□□ 0.55
PIF1Q9H611 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PIF1Q9H611 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.47■□□□□ 0.55
PIF1Q9H611 HTR7P1-202ENST00000624664 4411 ntBASIC18.47■□□□□ 0.55
PIF1Q9H611 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PIF1Q9H611 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.47■□□□□ 0.55
PIF1Q9H611 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PIF1Q9H611 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PIF1Q9H611 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PIF1Q9H611 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PIF1Q9H611 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PIF1Q9H611 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PIF1Q9H611 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.47■□□□□ 0.55
PIF1Q9H611 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.47■□□□□ 0.55
PIF1Q9H611 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.47■□□□□ 0.55
PIF1Q9H611 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.47■□□□□ 0.55
PIF1Q9H611 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PIF1Q9H611 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PIF1Q9H611 AC231657.2-201ENST00000624556 255 ntBASIC18.47■□□□□ 0.55
PIF1Q9H611 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.47■□□□□ 0.55
PIF1Q9H611 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PIF1Q9H611 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PIF1Q9H611 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PIF1Q9H611 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PIF1Q9H611 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PIF1Q9H611 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.47■□□□□ 0.55
PIF1Q9H611 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.47■□□□□ 0.55
PIF1Q9H611 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PIF1Q9H611 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PIF1Q9H611 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PIF1Q9H611 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PIF1Q9H611 AC018470.1-201ENST00000624790 3129 ntBASIC18.47■□□□□ 0.55
PIF1Q9H611 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PIF1Q9H611 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PIF1Q9H611 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PIF1Q9H611 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PIF1Q9H611 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PIF1Q9H611 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PIF1Q9H611 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PIF1Q9H611 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PIF1Q9H611 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms