Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC22.9■■□□□ 1.26
RNF41Q9H4P4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RNF41Q9H4P4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RNF41Q9H4P4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RNF41Q9H4P4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
RNF41Q9H4P4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
RNF41Q9H4P4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC22.89■■□□□ 1.26
RNF41Q9H4P4 AC104417.2-201ENST00000562989 1793 ntBASIC22.89■■□□□ 1.26
RNF41Q9H4P4 KRT17P2-201ENST00000300992 1314 ntBASIC22.89■■□□□ 1.26
RNF41Q9H4P4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC22.89■■□□□ 1.26
RNF41Q9H4P4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
RNF41Q9H4P4 TSPY7P-201ENST00000431358 1114 ntBASIC22.89■■□□□ 1.25
RNF41Q9H4P4 AL355355.2-201ENST00000442321 338 ntBASIC22.89■■□□□ 1.25
RNF41Q9H4P4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC22.89■■□□□ 1.25
RNF41Q9H4P4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC22.89■■□□□ 1.25
RNF41Q9H4P4 NUDT16P1-203ENST00000513809 620 ntBASIC22.89■■□□□ 1.25
RNF41Q9H4P4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC22.89■■□□□ 1.25
RNF41Q9H4P4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
RNF41Q9H4P4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RNF41Q9H4P4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC22.89■■□□□ 1.25
RNF41Q9H4P4 ABBA01031674.1-201ENST00000635145 728 ntBASIC22.89■■□□□ 1.25
RNF41Q9H4P4 AL158211.5-201ENST00000623583 2518 ntBASIC22.89■■□□□ 1.25
RNF41Q9H4P4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RNF41Q9H4P4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RNF41Q9H4P4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF41Q9H4P4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC22.88■■□□□ 1.25
RNF41Q9H4P4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF41Q9H4P4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF41Q9H4P4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC22.88■■□□□ 1.25
RNF41Q9H4P4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF41Q9H4P4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RNF41Q9H4P4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC22.88■■□□□ 1.25
RNF41Q9H4P4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC22.88■■□□□ 1.25
RNF41Q9H4P4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC22.88■■□□□ 1.25
RNF41Q9H4P4 AL596275.1-201ENST00000423464 877 ntBASIC22.88■■□□□ 1.25
RNF41Q9H4P4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC22.88■■□□□ 1.25
RNF41Q9H4P4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC22.88■■□□□ 1.25
RNF41Q9H4P4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC22.88■■□□□ 1.25
RNF41Q9H4P4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC22.88■■□□□ 1.25
RNF41Q9H4P4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RNF41Q9H4P4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC22.88■■□□□ 1.25
RNF41Q9H4P4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC22.88■■□□□ 1.25
RNF41Q9H4P4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RNF41Q9H4P4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
RNF41Q9H4P4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RNF41Q9H4P4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC22.88■■□□□ 1.25
RNF41Q9H4P4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF41Q9H4P4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC22.87■■□□□ 1.25
RNF41Q9H4P4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF41Q9H4P4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF41Q9H4P4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF41Q9H4P4 LINC01465-201ENST00000408887 1940 ntBASIC22.87■■□□□ 1.25
RNF41Q9H4P4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF41Q9H4P4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF41Q9H4P4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RNF41Q9H4P4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RNF41Q9H4P4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC22.87■■□□□ 1.25
RNF41Q9H4P4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC22.87■■□□□ 1.25
RNF41Q9H4P4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC22.87■■□□□ 1.25
RNF41Q9H4P4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC22.87■■□□□ 1.25
RNF41Q9H4P4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC22.87■■□□□ 1.25
RNF41Q9H4P4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC22.87■■□□□ 1.25
RNF41Q9H4P4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF41Q9H4P4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF41Q9H4P4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC22.87■■□□□ 1.25
RNF41Q9H4P4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC22.87■■□□□ 1.25
RNF41Q9H4P4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF41Q9H4P4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
RNF41Q9H4P4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC22.87■■□□□ 1.25
RNF41Q9H4P4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RNF41Q9H4P4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
RNF41Q9H4P4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
RNF41Q9H4P4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
RNF41Q9H4P4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC22.86■■□□□ 1.25
RNF41Q9H4P4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RNF41Q9H4P4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RNF41Q9H4P4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC22.86■■□□□ 1.25
RNF41Q9H4P4 Z85996.1-201ENST00000494644 937 ntBASIC22.86■■□□□ 1.25
RNF41Q9H4P4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC22.86■■□□□ 1.25
RNF41Q9H4P4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC22.86■■□□□ 1.25
RNF41Q9H4P4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RNF41Q9H4P4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RNF41Q9H4P4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC22.86■■□□□ 1.25
RNF41Q9H4P4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
RNF41Q9H4P4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
RNF41Q9H4P4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RNF41Q9H4P4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
RNF41Q9H4P4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RNF41Q9H4P4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RNF41Q9H4P4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RNF41Q9H4P4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
RNF41Q9H4P4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
RNF41Q9H4P4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RNF41Q9H4P4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RNF41Q9H4P4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RNF41Q9H4P4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RNF41Q9H4P4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RNF41Q9H4P4 AC116562.2-201ENST00000507042 360 ntBASIC22.85■■□□□ 1.25
RNF41Q9H4P4 AP003071.4-201ENST00000562276 1284 ntBASIC22.85■■□□□ 1.25
RNF41Q9H4P4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms