Protein–RNA interactions for Protein: Q9H4I3

TRABD, TraB domain-containing protein, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABDQ9H4I3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRABDQ9H4I3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRABDQ9H4I3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRABDQ9H4I3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRABDQ9H4I3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.92■□□□□ 0.78
TRABDQ9H4I3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRABDQ9H4I3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.92■□□□□ 0.78
TRABDQ9H4I3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.92■□□□□ 0.78
TRABDQ9H4I3 UNC93B4-201ENST00000505679 747 ntBASIC19.92■□□□□ 0.78
TRABDQ9H4I3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRABDQ9H4I3 SOX15-203ENST00000570788 1093 ntBASIC19.92■□□□□ 0.78
TRABDQ9H4I3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRABDQ9H4I3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRABDQ9H4I3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRABDQ9H4I3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRABDQ9H4I3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRABDQ9H4I3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRABDQ9H4I3 LINC01465-201ENST00000408887 1940 ntBASIC19.92■□□□□ 0.78
TRABDQ9H4I3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRABDQ9H4I3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.92■□□□□ 0.78
TRABDQ9H4I3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRABDQ9H4I3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRABDQ9H4I3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRABDQ9H4I3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
TRABDQ9H4I3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRABDQ9H4I3 PHGDH-210ENST00000641115 1638 ntBASIC19.91■□□□□ 0.78
TRABDQ9H4I3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRABDQ9H4I3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRABDQ9H4I3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRABDQ9H4I3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRABDQ9H4I3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
TRABDQ9H4I3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.91■□□□□ 0.78
TRABDQ9H4I3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.91■□□□□ 0.78
TRABDQ9H4I3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TRABDQ9H4I3 AC120498.8-201ENST00000614275 531 ntBASIC19.91■□□□□ 0.78
TRABDQ9H4I3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRABDQ9H4I3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRABDQ9H4I3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TRABDQ9H4I3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.91■□□□□ 0.78
TRABDQ9H4I3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.91■□□□□ 0.78
TRABDQ9H4I3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRABDQ9H4I3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRABDQ9H4I3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRABDQ9H4I3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRABDQ9H4I3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 AC008687.6-201ENST00000596318 630 ntBASIC19.9■□□□□ 0.78
TRABDQ9H4I3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 AP001271.2-201ENST00000624018 1556 ntBASIC19.9■□□□□ 0.78
TRABDQ9H4I3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRABDQ9H4I3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
TRABDQ9H4I3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.89■□□□□ 0.77
TRABDQ9H4I3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
TRABDQ9H4I3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.89■□□□□ 0.77
TRABDQ9H4I3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRABDQ9H4I3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRABDQ9H4I3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.89■□□□□ 0.77
TRABDQ9H4I3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRABDQ9H4I3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRABDQ9H4I3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRABDQ9H4I3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRABDQ9H4I3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRABDQ9H4I3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
TRABDQ9H4I3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.89■□□□□ 0.77
TRABDQ9H4I3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRABDQ9H4I3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRABDQ9H4I3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.89■□□□□ 0.77
TRABDQ9H4I3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.89■□□□□ 0.77
TRABDQ9H4I3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
TRABDQ9H4I3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.89■□□□□ 0.77
TRABDQ9H4I3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms