Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
RNF38Q9H0F5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.12■□□□□ 0.81
RNF38Q9H0F5 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF38Q9H0F5 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF38Q9H0F5 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF38Q9H0F5 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RNF38Q9H0F5 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF38Q9H0F5 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF38Q9H0F5 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF38Q9H0F5 TERF1P1-201ENST00000311003 1181 ntBASIC20.11■□□□□ 0.81
RNF38Q9H0F5 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RNF38Q9H0F5 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF38Q9H0F5 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
RNF38Q9H0F5 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF38Q9H0F5 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF38Q9H0F5 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RNF38Q9H0F5 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF38Q9H0F5 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF38Q9H0F5 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF38Q9H0F5 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF38Q9H0F5 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RNF38Q9H0F5 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RNF38Q9H0F5 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF38Q9H0F5 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF38Q9H0F5 KRT18P57-201ENST00000443599 1254 ntBASIC20.1■□□□□ 0.81
RNF38Q9H0F5 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.1■□□□□ 0.81
RNF38Q9H0F5 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.1■□□□□ 0.81
RNF38Q9H0F5 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF38Q9H0F5 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF38Q9H0F5 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RNF38Q9H0F5 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF38Q9H0F5 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF38Q9H0F5 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF38Q9H0F5 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF38Q9H0F5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF38Q9H0F5 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF38Q9H0F5 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF38Q9H0F5 LINC01521-201ENST00000504184 1943 ntBASIC20.1■□□□□ 0.81
RNF38Q9H0F5 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF38Q9H0F5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF38Q9H0F5 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF38Q9H0F5 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF38Q9H0F5 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF38Q9H0F5 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.09■□□□□ 0.81
RNF38Q9H0F5 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF38Q9H0F5 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF38Q9H0F5 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
RNF38Q9H0F5 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF38Q9H0F5 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF38Q9H0F5 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF38Q9H0F5 AL137013.1-201ENST00000432946 1228 ntBASIC20.09■□□□□ 0.81
RNF38Q9H0F5 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF38Q9H0F5 AC010203.1-204ENST00000548782 407 ntBASIC20.09■□□□□ 0.81
RNF38Q9H0F5 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF38Q9H0F5 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF38Q9H0F5 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF38Q9H0F5 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF38Q9H0F5 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF38Q9H0F5 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF38Q9H0F5 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF38Q9H0F5 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
RNF38Q9H0F5 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF38Q9H0F5 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RNF38Q9H0F5 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
RNF38Q9H0F5 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RNF38Q9H0F5 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RNF38Q9H0F5 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.08■□□□□ 0.81
RNF38Q9H0F5 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF38Q9H0F5 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF38Q9H0F5 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
RNF38Q9H0F5 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
RNF38Q9H0F5 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF38Q9H0F5 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.08■□□□□ 0.81
RNF38Q9H0F5 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.08■□□□□ 0.81
RNF38Q9H0F5 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RNF38Q9H0F5 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.08■□□□□ 0.81
RNF38Q9H0F5 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.08■□□□□ 0.81
RNF38Q9H0F5 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.08■□□□□ 0.81
RNF38Q9H0F5 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
RNF38Q9H0F5 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.08■□□□□ 0.8
RNF38Q9H0F5 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RNF38Q9H0F5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RNF38Q9H0F5 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RNF38Q9H0F5 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.08■□□□□ 0.8
RNF38Q9H0F5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF38Q9H0F5 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF38Q9H0F5 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
RNF38Q9H0F5 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF38Q9H0F5 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF38Q9H0F5 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF38Q9H0F5 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF38Q9H0F5 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF38Q9H0F5 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF38Q9H0F5 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF38Q9H0F5 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
RNF38Q9H0F5 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.07■□□□□ 0.8
RNF38Q9H0F5 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF38Q9H0F5 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF38Q9H0F5 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.07■□□□□ 0.8
RNF38Q9H0F5 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms