Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 KRT8P36-201ENST00000489121 1440 ntBASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC5.23□□□□□ -1.57
LCE3DQ9BYE3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 PCDHB18P-201ENST00000524813 2368 ntBASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 AC009113.1-201ENST00000570267 2443 ntBASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 EEF1DP3-203ENST00000566025 782 ntBASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 AC090164.3-201ENST00000610780 2143 ntBASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 AC011298.3-201ENST00000615796 283 ntBASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 AC120498.10-201ENST00000621827 505 ntBASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC5.22□□□□□ -1.57
LCE3DQ9BYE3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms