Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
COPS4Q9BT78 LTB4R2-202ENST00000528054 3092 ntBASIC17.76■□□□□ 0.43
COPS4Q9BT78 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COPS4Q9BT78 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COPS4Q9BT78 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COPS4Q9BT78 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COPS4Q9BT78 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COPS4Q9BT78 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COPS4Q9BT78 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COPS4Q9BT78 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COPS4Q9BT78 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COPS4Q9BT78 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COPS4Q9BT78 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
COPS4Q9BT78 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.76■□□□□ 0.43
COPS4Q9BT78 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COPS4Q9BT78 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COPS4Q9BT78 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COPS4Q9BT78 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COPS4Q9BT78 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COPS4Q9BT78 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COPS4Q9BT78 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COPS4Q9BT78 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COPS4Q9BT78 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.75■□□□□ 0.43
COPS4Q9BT78 KRT8P17-201ENST00000453110 1448 ntBASIC17.75■□□□□ 0.43
COPS4Q9BT78 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
COPS4Q9BT78 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COPS4Q9BT78 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.75■□□□□ 0.43
COPS4Q9BT78 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.75■□□□□ 0.43
COPS4Q9BT78 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
COPS4Q9BT78 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
COPS4Q9BT78 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.75■□□□□ 0.43
COPS4Q9BT78 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.75■□□□□ 0.43
COPS4Q9BT78 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COPS4Q9BT78 RARRES2P6-201ENST00000567333 442 ntBASIC17.75■□□□□ 0.43
COPS4Q9BT78 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
COPS4Q9BT78 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COPS4Q9BT78 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.75■□□□□ 0.43
COPS4Q9BT78 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.75■□□□□ 0.43
COPS4Q9BT78 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COPS4Q9BT78 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.75■□□□□ 0.43
COPS4Q9BT78 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COPS4Q9BT78 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COPS4Q9BT78 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COPS4Q9BT78 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COPS4Q9BT78 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.74■□□□□ 0.43
COPS4Q9BT78 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COPS4Q9BT78 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COPS4Q9BT78 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
COPS4Q9BT78 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COPS4Q9BT78 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
COPS4Q9BT78 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.74■□□□□ 0.43
COPS4Q9BT78 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COPS4Q9BT78 PTBP1P-201ENST00000554374 1601 ntBASIC17.74■□□□□ 0.43
COPS4Q9BT78 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.74■□□□□ 0.43
COPS4Q9BT78 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.74■□□□□ 0.43
COPS4Q9BT78 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COPS4Q9BT78 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.74■□□□□ 0.43
COPS4Q9BT78 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COPS4Q9BT78 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.74■□□□□ 0.43
COPS4Q9BT78 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.74■□□□□ 0.43
COPS4Q9BT78 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.74■□□□□ 0.43
COPS4Q9BT78 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
COPS4Q9BT78 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
COPS4Q9BT78 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
COPS4Q9BT78 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COPS4Q9BT78 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
COPS4Q9BT78 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COPS4Q9BT78 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
COPS4Q9BT78 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COPS4Q9BT78 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COPS4Q9BT78 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
COPS4Q9BT78 AC090164.3-201ENST00000610780 2143 ntBASIC17.74■□□□□ 0.43
COPS4Q9BT78 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
COPS4Q9BT78 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
COPS4Q9BT78 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COPS4Q9BT78 AL133373.2-201ENST00000623187 2828 ntBASIC17.73■□□□□ 0.43
COPS4Q9BT78 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COPS4Q9BT78 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COPS4Q9BT78 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COPS4Q9BT78 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COPS4Q9BT78 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COPS4Q9BT78 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COPS4Q9BT78 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.73■□□□□ 0.43
COPS4Q9BT78 AC007322.4-201ENST00000509611 723 ntBASIC17.73■□□□□ 0.43
COPS4Q9BT78 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.73■□□□□ 0.43
COPS4Q9BT78 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COPS4Q9BT78 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.73■□□□□ 0.43
COPS4Q9BT78 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COPS4Q9BT78 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.73■□□□□ 0.43
COPS4Q9BT78 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COPS4Q9BT78 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.73■□□□□ 0.43
COPS4Q9BT78 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COPS4Q9BT78 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
COPS4Q9BT78 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.73■□□□□ 0.43
COPS4Q9BT78 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
COPS4Q9BT78 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COPS4Q9BT78 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COPS4Q9BT78 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COPS4Q9BT78 PCDHB18P-201ENST00000524813 2368 ntBASIC17.73■□□□□ 0.43
COPS4Q9BT78 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms