Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TIMP4Q99727 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TIMP4Q99727 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TIMP4Q99727 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.78■□□□□ 0.44
TIMP4Q99727 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TIMP4Q99727 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
TIMP4Q99727 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TIMP4Q99727 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
TIMP4Q99727 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.78■□□□□ 0.44
TIMP4Q99727 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.78■□□□□ 0.44
TIMP4Q99727 AL353807.1-201ENST00000427475 662 ntBASIC17.78■□□□□ 0.44
TIMP4Q99727 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TIMP4Q99727 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.78■□□□□ 0.44
TIMP4Q99727 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.78■□□□□ 0.44
TIMP4Q99727 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.78■□□□□ 0.44
TIMP4Q99727 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.78■□□□□ 0.44
TIMP4Q99727 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.78■□□□□ 0.44
TIMP4Q99727 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TIMP4Q99727 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
TIMP4Q99727 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.78■□□□□ 0.44
TIMP4Q99727 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TIMP4Q99727 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TIMP4Q99727 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TIMP4Q99727 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TIMP4Q99727 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TIMP4Q99727 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TIMP4Q99727 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.77■□□□□ 0.44
TIMP4Q99727 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TIMP4Q99727 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.77■□□□□ 0.44
TIMP4Q99727 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TIMP4Q99727 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.77■□□□□ 0.44
TIMP4Q99727 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TIMP4Q99727 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.77■□□□□ 0.44
TIMP4Q99727 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TIMP4Q99727 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.77■□□□□ 0.44
TIMP4Q99727 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.77■□□□□ 0.44
TIMP4Q99727 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.77■□□□□ 0.44
TIMP4Q99727 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.77■□□□□ 0.44
TIMP4Q99727 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.77■□□□□ 0.44
TIMP4Q99727 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TIMP4Q99727 TFP1-202ENST00000475455 1573 ntBASIC17.77■□□□□ 0.44
TIMP4Q99727 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TIMP4Q99727 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
TIMP4Q99727 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TIMP4Q99727 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.77■□□□□ 0.43
TIMP4Q99727 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
TIMP4Q99727 AP006587.1-201ENST00000534129 1502 ntBASIC17.77■□□□□ 0.43
TIMP4Q99727 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.77■□□□□ 0.43
TIMP4Q99727 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TIMP4Q99727 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TIMP4Q99727 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TIMP4Q99727 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.77■□□□□ 0.43
TIMP4Q99727 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TIMP4Q99727 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TIMP4Q99727 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TIMP4Q99727 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TIMP4Q99727 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.76■□□□□ 0.43
TIMP4Q99727 AC018553.1-201ENST00000616682 1458 ntBASIC17.76■□□□□ 0.43
TIMP4Q99727 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TIMP4Q99727 Z82202.1-201ENST00000623446 1880 ntBASIC17.76■□□□□ 0.43
TIMP4Q99727 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
TIMP4Q99727 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TIMP4Q99727 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TIMP4Q99727 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TIMP4Q99727 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TIMP4Q99727 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TIMP4Q99727 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.76■□□□□ 0.43
TIMP4Q99727 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TIMP4Q99727 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.76■□□□□ 0.43
TIMP4Q99727 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.76■□□□□ 0.43
TIMP4Q99727 MIR4785-201ENST00000585005 73 ntBASIC17.76■□□□□ 0.43
TIMP4Q99727 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.76■□□□□ 0.43
TIMP4Q99727 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.76■□□□□ 0.43
TIMP4Q99727 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
TIMP4Q99727 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.76■□□□□ 0.43
TIMP4Q99727 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TIMP4Q99727 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.76■□□□□ 0.43
TIMP4Q99727 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TIMP4Q99727 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TIMP4Q99727 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.75■□□□□ 0.43
TIMP4Q99727 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TIMP4Q99727 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TIMP4Q99727 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TIMP4Q99727 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TIMP4Q99727 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.75■□□□□ 0.43
TIMP4Q99727 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TIMP4Q99727 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TIMP4Q99727 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.75■□□□□ 0.43
TIMP4Q99727 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TIMP4Q99727 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TIMP4Q99727 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TIMP4Q99727 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TIMP4Q99727 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TIMP4Q99727 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TIMP4Q99727 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.75■□□□□ 0.43
TIMP4Q99727 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.75■□□□□ 0.43
TIMP4Q99727 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.75■□□□□ 0.43
TIMP4Q99727 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TIMP4Q99727 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TIMP4Q99727 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms