Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CRAMP1Q96RY5 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC23.78■■□□□ 1.4
CRAMP1Q96RY5 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.77■■□□□ 1.4
CRAMP1Q96RY5 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CRAMP1Q96RY5 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CRAMP1Q96RY5 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CRAMP1Q96RY5 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CRAMP1Q96RY5 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC23.77■■□□□ 1.4
CRAMP1Q96RY5 FXN-203ENST00000396366 922 ntTSL 2 BASIC23.77■■□□□ 1.4
CRAMP1Q96RY5 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC23.77■■□□□ 1.4
CRAMP1Q96RY5 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CRAMP1Q96RY5 CLEC4GP1-201ENST00000596555 870 ntBASIC23.77■■□□□ 1.4
CRAMP1Q96RY5 NDUFV2-AS1-203ENST00000608008 779 ntBASIC23.77■■□□□ 1.4
CRAMP1Q96RY5 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CRAMP1Q96RY5 ANKRD18DP-204ENST00000455355 1975 ntBASIC23.77■■□□□ 1.4
CRAMP1Q96RY5 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CRAMP1Q96RY5 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CRAMP1Q96RY5 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CRAMP1Q96RY5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.76■■□□□ 1.39
CRAMP1Q96RY5 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CRAMP1Q96RY5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CRAMP1Q96RY5 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
CRAMP1Q96RY5 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CRAMP1Q96RY5 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CRAMP1Q96RY5 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CRAMP1Q96RY5 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CRAMP1Q96RY5 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC23.76■■□□□ 1.39
CRAMP1Q96RY5 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CRAMP1Q96RY5 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC23.76■■□□□ 1.39
CRAMP1Q96RY5 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CRAMP1Q96RY5 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CRAMP1Q96RY5 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC23.76■■□□□ 1.39
CRAMP1Q96RY5 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CRAMP1Q96RY5 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC23.76■■□□□ 1.39
CRAMP1Q96RY5 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CRAMP1Q96RY5 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.76■■□□□ 1.39
CRAMP1Q96RY5 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
CRAMP1Q96RY5 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CRAMP1Q96RY5 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CRAMP1Q96RY5 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CRAMP1Q96RY5 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CRAMP1Q96RY5 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CRAMP1Q96RY5 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CRAMP1Q96RY5 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC23.75■■□□□ 1.39
CRAMP1Q96RY5 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CRAMP1Q96RY5 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC23.75■■□□□ 1.39
CRAMP1Q96RY5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.75■■□□□ 1.39
CRAMP1Q96RY5 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CRAMP1Q96RY5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CRAMP1Q96RY5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CRAMP1Q96RY5 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.75■■□□□ 1.39
CRAMP1Q96RY5 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CRAMP1Q96RY5 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CRAMP1Q96RY5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
CRAMP1Q96RY5 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CRAMP1Q96RY5 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC23.74■■□□□ 1.39
CRAMP1Q96RY5 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CRAMP1Q96RY5 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CRAMP1Q96RY5 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CRAMP1Q96RY5 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC23.74■■□□□ 1.39
CRAMP1Q96RY5 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CRAMP1Q96RY5 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC23.74■■□□□ 1.39
CRAMP1Q96RY5 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC23.74■■□□□ 1.39
CRAMP1Q96RY5 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CRAMP1Q96RY5 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC23.74■■□□□ 1.39
CRAMP1Q96RY5 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC23.74■■□□□ 1.39
CRAMP1Q96RY5 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CRAMP1Q96RY5 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CRAMP1Q96RY5 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CRAMP1Q96RY5 LINC01311-201ENST00000565162 1445 ntBASIC23.74■■□□□ 1.39
CRAMP1Q96RY5 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
CRAMP1Q96RY5 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
CRAMP1Q96RY5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.74■■□□□ 1.39
CRAMP1Q96RY5 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CRAMP1Q96RY5 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CRAMP1Q96RY5 DET1-207ENST00000564406 2315 ntTSL 2 BASIC23.73■■□□□ 1.39
CRAMP1Q96RY5 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC23.73■■□□□ 1.39
CRAMP1Q96RY5 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
CRAMP1Q96RY5 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CRAMP1Q96RY5 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC23.73■■□□□ 1.39
CRAMP1Q96RY5 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CRAMP1Q96RY5 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC23.73■■□□□ 1.39
CRAMP1Q96RY5 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC23.73■■□□□ 1.39
CRAMP1Q96RY5 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC23.73■■□□□ 1.39
CRAMP1Q96RY5 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC23.73■■□□□ 1.39
CRAMP1Q96RY5 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC23.73■■□□□ 1.39
CRAMP1Q96RY5 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC23.73■■□□□ 1.39
CRAMP1Q96RY5 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CRAMP1Q96RY5 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC23.73■■□□□ 1.39
CRAMP1Q96RY5 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC23.73■■□□□ 1.39
CRAMP1Q96RY5 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC23.73■■□□□ 1.39
CRAMP1Q96RY5 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC23.73■■□□□ 1.39
CRAMP1Q96RY5 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
CRAMP1Q96RY5 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
CRAMP1Q96RY5 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CRAMP1Q96RY5 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC23.72■■□□□ 1.39
CRAMP1Q96RY5 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC23.72■■□□□ 1.39
CRAMP1Q96RY5 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
CRAMP1Q96RY5 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC23.72■■□□□ 1.39
CRAMP1Q96RY5 MIR4674-201ENST00000582457 87 ntBASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms