Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NR1H4Q96RI1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.25■□□□□ 0.51
NR1H4Q96RI1 ESPNP-201ENST00000270691 2015 ntBASIC18.25■□□□□ 0.51
NR1H4Q96RI1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NR1H4Q96RI1 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NR1H4Q96RI1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NR1H4Q96RI1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NR1H4Q96RI1 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
NR1H4Q96RI1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.24■□□□□ 0.51
NR1H4Q96RI1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
NR1H4Q96RI1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.24■□□□□ 0.51
NR1H4Q96RI1 FP475955.4-201ENST00000623131 1990 ntBASIC18.24■□□□□ 0.51
NR1H4Q96RI1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NR1H4Q96RI1 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NR1H4Q96RI1 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NR1H4Q96RI1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NR1H4Q96RI1 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NR1H4Q96RI1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.24■□□□□ 0.51
NR1H4Q96RI1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NR1H4Q96RI1 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.24■□□□□ 0.51
NR1H4Q96RI1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.24■□□□□ 0.51
NR1H4Q96RI1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
NR1H4Q96RI1 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NR1H4Q96RI1 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NR1H4Q96RI1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NR1H4Q96RI1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NR1H4Q96RI1 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NR1H4Q96RI1 KRT8P36-201ENST00000489121 1440 ntBASIC18.23■□□□□ 0.51
NR1H4Q96RI1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NR1H4Q96RI1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NR1H4Q96RI1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NR1H4Q96RI1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
NR1H4Q96RI1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
NR1H4Q96RI1 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NR1H4Q96RI1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NR1H4Q96RI1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NR1H4Q96RI1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NR1H4Q96RI1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.23■□□□□ 0.51
NR1H4Q96RI1 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NR1H4Q96RI1 MIR4466-201ENST00000606121 54 ntBASIC18.23■□□□□ 0.51
NR1H4Q96RI1 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.23■□□□□ 0.51
NR1H4Q96RI1 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.23■□□□□ 0.51
NR1H4Q96RI1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.23■□□□□ 0.51
NR1H4Q96RI1 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NR1H4Q96RI1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NR1H4Q96RI1 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.23■□□□□ 0.51
NR1H4Q96RI1 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NR1H4Q96RI1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.23■□□□□ 0.51
NR1H4Q96RI1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NR1H4Q96RI1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NR1H4Q96RI1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.23■□□□□ 0.51
NR1H4Q96RI1 AC011270.2-201ENST00000624293 2550 ntBASIC18.23■□□□□ 0.51
NR1H4Q96RI1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
NR1H4Q96RI1 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NR1H4Q96RI1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 SERBP1P1-201ENST00000396021 1160 ntBASIC18.22■□□□□ 0.51
NR1H4Q96RI1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NR1H4Q96RI1 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.21■□□□□ 0.51
NR1H4Q96RI1 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
NR1H4Q96RI1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.21■□□□□ 0.51
NR1H4Q96RI1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.21■□□□□ 0.51
NR1H4Q96RI1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.21■□□□□ 0.51
NR1H4Q96RI1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
NR1H4Q96RI1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.21■□□□□ 0.51
NR1H4Q96RI1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.21■□□□□ 0.51
NR1H4Q96RI1 LINC00896-202ENST00000609602 2128 ntBASIC18.21■□□□□ 0.51
NR1H4Q96RI1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NR1H4Q96RI1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NR1H4Q96RI1 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
NR1H4Q96RI1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms