Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CMTM3Q96MX0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CMTM3Q96MX0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CMTM3Q96MX0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CMTM3Q96MX0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CMTM3Q96MX0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.68■□□□□ 0.26
CMTM3Q96MX0 AF213884.3-201ENST00000563833 479 ntBASIC16.68■□□□□ 0.26
CMTM3Q96MX0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CMTM3Q96MX0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CMTM3Q96MX0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CMTM3Q96MX0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CMTM3Q96MX0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CMTM3Q96MX0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CMTM3Q96MX0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CMTM3Q96MX0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.68■□□□□ 0.26
CMTM3Q96MX0 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 LINC02228-203ENST00000641970 1355 ntBASIC16.67■□□□□ 0.26
CMTM3Q96MX0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 AC027612.3-201ENST00000413684 1047 ntBASIC16.67■□□□□ 0.26
CMTM3Q96MX0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 AL136967.2-201ENST00000623968 743 ntBASIC16.67■□□□□ 0.26
CMTM3Q96MX0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.67■□□□□ 0.26
CMTM3Q96MX0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.66■□□□□ 0.26
CMTM3Q96MX0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CMTM3Q96MX0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CMTM3Q96MX0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
CMTM3Q96MX0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CMTM3Q96MX0 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CMTM3Q96MX0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.66■□□□□ 0.26
CMTM3Q96MX0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.66■□□□□ 0.26
CMTM3Q96MX0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CMTM3Q96MX0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CMTM3Q96MX0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CMTM3Q96MX0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CMTM3Q96MX0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CMTM3Q96MX0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CMTM3Q96MX0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.66■□□□□ 0.26
CMTM3Q96MX0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.66■□□□□ 0.26
CMTM3Q96MX0 MFSD11-216ENST00000590393 1141 ntBASIC16.66■□□□□ 0.26
CMTM3Q96MX0 MIR6084-201ENST00000622012 110 ntBASIC16.66■□□□□ 0.26
CMTM3Q96MX0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CMTM3Q96MX0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CMTM3Q96MX0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CMTM3Q96MX0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.66■□□□□ 0.26
CMTM3Q96MX0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.66■□□□□ 0.26
CMTM3Q96MX0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CMTM3Q96MX0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CMTM3Q96MX0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CMTM3Q96MX0 AL162741.1-201ENST00000565563 1558 ntBASIC16.65■□□□□ 0.26
CMTM3Q96MX0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CMTM3Q96MX0 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CMTM3Q96MX0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CMTM3Q96MX0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CMTM3Q96MX0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CMTM3Q96MX0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CMTM3Q96MX0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.65■□□□□ 0.26
CMTM3Q96MX0 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CMTM3Q96MX0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CMTM3Q96MX0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CMTM3Q96MX0 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CMTM3Q96MX0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CMTM3Q96MX0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.65■□□□□ 0.26
CMTM3Q96MX0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CMTM3Q96MX0 LTB4R2-202ENST00000528054 3092 ntBASIC16.65■□□□□ 0.26
CMTM3Q96MX0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CMTM3Q96MX0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CMTM3Q96MX0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CMTM3Q96MX0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
CMTM3Q96MX0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms