Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.45■□□□□ 0.54
ITCHQ96J02 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ITCHQ96J02 AL161938.1-201ENST00000569833 2180 ntBASIC18.45■□□□□ 0.54
ITCHQ96J02 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ITCHQ96J02 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ITCHQ96J02 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ITCHQ96J02 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.45■□□□□ 0.54
ITCHQ96J02 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ITCHQ96J02 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
ITCHQ96J02 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ITCHQ96J02 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
ITCHQ96J02 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ITCHQ96J02 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
ITCHQ96J02 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ITCHQ96J02 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ITCHQ96J02 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.44■□□□□ 0.54
ITCHQ96J02 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.44■□□□□ 0.54
ITCHQ96J02 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.44■□□□□ 0.54
ITCHQ96J02 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.44■□□□□ 0.54
ITCHQ96J02 MIR5787-201ENST00000611784 55 ntBASIC18.44■□□□□ 0.54
ITCHQ96J02 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ITCHQ96J02 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.44■□□□□ 0.54
ITCHQ96J02 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
ITCHQ96J02 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
ITCHQ96J02 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ITCHQ96J02 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ITCHQ96J02 AL138781.2-201ENST00000617896 1843 ntBASIC18.44■□□□□ 0.54
ITCHQ96J02 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ITCHQ96J02 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
ITCHQ96J02 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
ITCHQ96J02 ZNF815P-204ENST00000434898 1737 ntBASIC18.43■□□□□ 0.54
ITCHQ96J02 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
ITCHQ96J02 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ITCHQ96J02 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ITCHQ96J02 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ITCHQ96J02 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ITCHQ96J02 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.43■□□□□ 0.54
ITCHQ96J02 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.43■□□□□ 0.54
ITCHQ96J02 AC073210.2-201ENST00000430369 194 ntBASIC18.43■□□□□ 0.54
ITCHQ96J02 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.43■□□□□ 0.54
ITCHQ96J02 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ITCHQ96J02 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.43■□□□□ 0.54
ITCHQ96J02 AC022517.1-201ENST00000592429 346 ntBASIC18.43■□□□□ 0.54
ITCHQ96J02 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.43■□□□□ 0.54
ITCHQ96J02 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ITCHQ96J02 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
ITCHQ96J02 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ITCHQ96J02 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ITCHQ96J02 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ITCHQ96J02 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ITCHQ96J02 TEX21P-204ENST00000641479 1693 ntBASIC18.43■□□□□ 0.54
ITCHQ96J02 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
ITCHQ96J02 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ITCHQ96J02 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
ITCHQ96J02 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ITCHQ96J02 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ITCHQ96J02 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
ITCHQ96J02 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ITCHQ96J02 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ITCHQ96J02 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.42■□□□□ 0.54
ITCHQ96J02 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.42■□□□□ 0.54
ITCHQ96J02 AC026471.1-201ENST00000564629 3026 ntBASIC18.42■□□□□ 0.54
ITCHQ96J02 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
ITCHQ96J02 HCG11-201ENST00000411553 5696 ntBASIC18.42■□□□□ 0.54
ITCHQ96J02 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ITCHQ96J02 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ITCHQ96J02 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ITCHQ96J02 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ITCHQ96J02 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
ITCHQ96J02 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.42■□□□□ 0.54
ITCHQ96J02 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.42■□□□□ 0.54
ITCHQ96J02 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ITCHQ96J02 BX276092.2-201ENST00000417668 665 ntBASIC18.42■□□□□ 0.54
ITCHQ96J02 AF201337.1-201ENST00000520239 748 ntBASIC18.42■□□□□ 0.54
ITCHQ96J02 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.42■□□□□ 0.54
ITCHQ96J02 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.42■□□□□ 0.54
ITCHQ96J02 AC105036.2-201ENST00000569468 176 ntBASIC18.42■□□□□ 0.54
ITCHQ96J02 AC005829.2-201ENST00000571422 1056 ntBASIC18.42■□□□□ 0.54
ITCHQ96J02 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.42■□□□□ 0.54
ITCHQ96J02 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ITCHQ96J02 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ITCHQ96J02 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
ITCHQ96J02 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ITCHQ96J02 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
ITCHQ96J02 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ITCHQ96J02 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ITCHQ96J02 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
ITCHQ96J02 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ITCHQ96J02 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ITCHQ96J02 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ITCHQ96J02 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ITCHQ96J02 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ITCHQ96J02 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.41■□□□□ 0.54
ITCHQ96J02 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ITCHQ96J02 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ITCHQ96J02 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ITCHQ96J02 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.41■□□□□ 0.54
ITCHQ96J02 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.41■□□□□ 0.54
ITCHQ96J02 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ITCHQ96J02 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms