Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TIMD4Q96H15 LINC01006-201ENST00000333319 2292 ntBASIC16.28■□□□□ 0.2
TIMD4Q96H15 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TIMD4Q96H15 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.28■□□□□ 0.2
TIMD4Q96H15 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMD4Q96H15 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMD4Q96H15 MIR1238-201ENST00000408483 83 ntBASIC16.28■□□□□ 0.2
TIMD4Q96H15 ECEL1P3-201ENST00000427961 737 ntBASIC16.28■□□□□ 0.2
TIMD4Q96H15 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TIMD4Q96H15 TSPY15P-201ENST00000457163 923 ntBASIC16.28■□□□□ 0.2
TIMD4Q96H15 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TIMD4Q96H15 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.28■□□□□ 0.2
TIMD4Q96H15 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.28■□□□□ 0.2
TIMD4Q96H15 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.28■□□□□ 0.2
TIMD4Q96H15 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.28■□□□□ 0.2
TIMD4Q96H15 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TIMD4Q96H15 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.28■□□□□ 0.2
TIMD4Q96H15 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.28■□□□□ 0.2
TIMD4Q96H15 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMD4Q96H15 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TIMD4Q96H15 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.28■□□□□ 0.2
TIMD4Q96H15 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMD4Q96H15 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMD4Q96H15 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TIMD4Q96H15 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TIMD4Q96H15 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TIMD4Q96H15 AC099778.1-201ENST00000568593 1911 ntBASIC16.27■□□□□ 0.2
TIMD4Q96H15 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TIMD4Q96H15 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.27■□□□□ 0.2
TIMD4Q96H15 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TIMD4Q96H15 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TIMD4Q96H15 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
TIMD4Q96H15 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TIMD4Q96H15 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TIMD4Q96H15 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
TIMD4Q96H15 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TIMD4Q96H15 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
TIMD4Q96H15 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TIMD4Q96H15 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TIMD4Q96H15 AC004951.3-201ENST00000418645 1148 ntBASIC16.27■□□□□ 0.2
TIMD4Q96H15 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.27■□□□□ 0.2
TIMD4Q96H15 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.27■□□□□ 0.2
TIMD4Q96H15 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.27■□□□□ 0.2
TIMD4Q96H15 B3GAT3P1-201ENST00000471720 806 ntBASIC16.27■□□□□ 0.2
TIMD4Q96H15 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
TIMD4Q96H15 AL160286.2-201ENST00000567150 934 ntBASIC16.27■□□□□ 0.2
TIMD4Q96H15 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.27■□□□□ 0.2
TIMD4Q96H15 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.27■□□□□ 0.2
TIMD4Q96H15 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.27■□□□□ 0.2
TIMD4Q96H15 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TIMD4Q96H15 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TIMD4Q96H15 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
TIMD4Q96H15 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TIMD4Q96H15 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TIMD4Q96H15 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TIMD4Q96H15 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
TIMD4Q96H15 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TIMD4Q96H15 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TIMD4Q96H15 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
TIMD4Q96H15 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
TIMD4Q96H15 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TIMD4Q96H15 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TIMD4Q96H15 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TIMD4Q96H15 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TIMD4Q96H15 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TIMD4Q96H15 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TIMD4Q96H15 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
TIMD4Q96H15 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TIMD4Q96H15 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
TIMD4Q96H15 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TIMD4Q96H15 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TIMD4Q96H15 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TIMD4Q96H15 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TIMD4Q96H15 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TIMD4Q96H15 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.26■□□□□ 0.19
TIMD4Q96H15 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TIMD4Q96H15 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TIMD4Q96H15 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.26■□□□□ 0.19
TIMD4Q96H15 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.26■□□□□ 0.19
TIMD4Q96H15 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.26■□□□□ 0.19
TIMD4Q96H15 NAPSB-206ENST00000562112 1266 ntBASIC16.26■□□□□ 0.19
TIMD4Q96H15 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.26■□□□□ 0.19
TIMD4Q96H15 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.26■□□□□ 0.19
TIMD4Q96H15 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TIMD4Q96H15 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TIMD4Q96H15 AC011298.2-201ENST00000617989 482 ntBASIC16.26■□□□□ 0.19
TIMD4Q96H15 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.26■□□□□ 0.19
TIMD4Q96H15 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TIMD4Q96H15 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TIMD4Q96H15 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TIMD4Q96H15 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TIMD4Q96H15 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
TIMD4Q96H15 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.26■□□□□ 0.19
TIMD4Q96H15 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.26■□□□□ 0.19
TIMD4Q96H15 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.26■□□□□ 0.19
TIMD4Q96H15 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TIMD4Q96H15 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TIMD4Q96H15 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TIMD4Q96H15 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TIMD4Q96H15 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms