Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 TEX21P-204ENST00000641479 1693 ntBASIC20.48■□□□□ 0.87
TRIM11Q96F44 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM11Q96F44 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM11Q96F44 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM11Q96F44 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.48■□□□□ 0.87
TRIM11Q96F44 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM11Q96F44 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM11Q96F44 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM11Q96F44 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM11Q96F44 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM11Q96F44 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM11Q96F44 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM11Q96F44 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM11Q96F44 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM11Q96F44 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM11Q96F44 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM11Q96F44 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.48■□□□□ 0.87
TRIM11Q96F44 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM11Q96F44 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM11Q96F44 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM11Q96F44 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TRIM11Q96F44 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
TRIM11Q96F44 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM11Q96F44 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.48■□□□□ 0.87
TRIM11Q96F44 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM11Q96F44 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM11Q96F44 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
TRIM11Q96F44 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.48■□□□□ 0.87
TRIM11Q96F44 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM11Q96F44 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
TRIM11Q96F44 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM11Q96F44 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM11Q96F44 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM11Q96F44 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM11Q96F44 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM11Q96F44 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM11Q96F44 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
TRIM11Q96F44 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM11Q96F44 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
TRIM11Q96F44 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM11Q96F44 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
TRIM11Q96F44 HLA-L-209ENST00000420110 1011 ntBASIC20.47■□□□□ 0.87
TRIM11Q96F44 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.47■□□□□ 0.87
TRIM11Q96F44 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.47■□□□□ 0.87
TRIM11Q96F44 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TRIM11Q96F44 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM11Q96F44 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM11Q96F44 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM11Q96F44 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM11Q96F44 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM11Q96F44 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TRIM11Q96F44 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM11Q96F44 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM11Q96F44 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM11Q96F44 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM11Q96F44 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM11Q96F44 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM11Q96F44 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM11Q96F44 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM11Q96F44 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM11Q96F44 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM11Q96F44 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM11Q96F44 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM11Q96F44 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM11Q96F44 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM11Q96F44 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM11Q96F44 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM11Q96F44 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM11Q96F44 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM11Q96F44 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM11Q96F44 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.46■□□□□ 0.87
TRIM11Q96F44 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM11Q96F44 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM11Q96F44 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM11Q96F44 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
TRIM11Q96F44 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
TRIM11Q96F44 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM11Q96F44 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM11Q96F44 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM11Q96F44 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM11Q96F44 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM11Q96F44 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM11Q96F44 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TRIM11Q96F44 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
TRIM11Q96F44 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
TRIM11Q96F44 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM11Q96F44 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM11Q96F44 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM11Q96F44 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM11Q96F44 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TRIM11Q96F44 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM11Q96F44 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
TRIM11Q96F44 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM11Q96F44 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.45■□□□□ 0.86
TRIM11Q96F44 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.45■□□□□ 0.86
TRIM11Q96F44 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM11Q96F44 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.45■□□□□ 0.86
TRIM11Q96F44 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.45■□□□□ 0.86
TRIM11Q96F44 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM11Q96F44 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms