Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
HDAC11Q96DB2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HDAC11Q96DB2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HDAC11Q96DB2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.94■□□□□ 0.78
HDAC11Q96DB2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.94■□□□□ 0.78
HDAC11Q96DB2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
HDAC11Q96DB2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HDAC11Q96DB2 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HDAC11Q96DB2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HDAC11Q96DB2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.94■□□□□ 0.78
HDAC11Q96DB2 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.94■□□□□ 0.78
HDAC11Q96DB2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HDAC11Q96DB2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.94■□□□□ 0.78
HDAC11Q96DB2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
HDAC11Q96DB2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HDAC11Q96DB2 AC007952.6-201ENST00000573168 2673 ntBASIC19.94■□□□□ 0.78
HDAC11Q96DB2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
HDAC11Q96DB2 AC003957.1-201ENST00000625108 2673 ntBASIC19.94■□□□□ 0.78
HDAC11Q96DB2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.94■□□□□ 0.78
HDAC11Q96DB2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.94■□□□□ 0.78
HDAC11Q96DB2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HDAC11Q96DB2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.93■□□□□ 0.78
HDAC11Q96DB2 NBPF21P-201ENST00000425093 1451 ntBASIC19.93■□□□□ 0.78
HDAC11Q96DB2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.93■□□□□ 0.78
HDAC11Q96DB2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HDAC11Q96DB2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HDAC11Q96DB2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.93■□□□□ 0.78
HDAC11Q96DB2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.93■□□□□ 0.78
HDAC11Q96DB2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
HDAC11Q96DB2 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
HDAC11Q96DB2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.93■□□□□ 0.78
HDAC11Q96DB2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.93■□□□□ 0.78
HDAC11Q96DB2 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.93■□□□□ 0.78
HDAC11Q96DB2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HDAC11Q96DB2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
HDAC11Q96DB2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.93■□□□□ 0.78
HDAC11Q96DB2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.93■□□□□ 0.78
HDAC11Q96DB2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
HDAC11Q96DB2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HDAC11Q96DB2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HDAC11Q96DB2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
HDAC11Q96DB2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
HDAC11Q96DB2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.93■□□□□ 0.78
HDAC11Q96DB2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HDAC11Q96DB2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HDAC11Q96DB2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HDAC11Q96DB2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HDAC11Q96DB2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HDAC11Q96DB2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HDAC11Q96DB2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HDAC11Q96DB2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HDAC11Q96DB2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HDAC11Q96DB2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.92■□□□□ 0.78
HDAC11Q96DB2 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
HDAC11Q96DB2 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HDAC11Q96DB2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.92■□□□□ 0.78
HDAC11Q96DB2 POU5F1P3-201ENST00000428824 1078 ntBASIC19.92■□□□□ 0.78
HDAC11Q96DB2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.92■□□□□ 0.78
HDAC11Q96DB2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HDAC11Q96DB2 AC006058.3-201ENST00000606217 1069 ntBASIC19.92■□□□□ 0.78
HDAC11Q96DB2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.92■□□□□ 0.78
HDAC11Q96DB2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
HDAC11Q96DB2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.92■□□□□ 0.78
HDAC11Q96DB2 ZNF815P-204ENST00000434898 1737 ntBASIC19.92■□□□□ 0.78
HDAC11Q96DB2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
HDAC11Q96DB2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
HDAC11Q96DB2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HDAC11Q96DB2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HDAC11Q96DB2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HDAC11Q96DB2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
HDAC11Q96DB2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
HDAC11Q96DB2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HDAC11Q96DB2 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.92■□□□□ 0.78
HDAC11Q96DB2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
HDAC11Q96DB2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
HDAC11Q96DB2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HDAC11Q96DB2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.91■□□□□ 0.78
HDAC11Q96DB2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.91■□□□□ 0.78
HDAC11Q96DB2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HDAC11Q96DB2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HDAC11Q96DB2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
HDAC11Q96DB2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
HDAC11Q96DB2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
HDAC11Q96DB2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HDAC11Q96DB2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HDAC11Q96DB2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.91■□□□□ 0.78
HDAC11Q96DB2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
HDAC11Q96DB2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.91■□□□□ 0.78
HDAC11Q96DB2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.91■□□□□ 0.78
HDAC11Q96DB2 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.91■□□□□ 0.78
HDAC11Q96DB2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.91■□□□□ 0.78
HDAC11Q96DB2 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.91■□□□□ 0.78
HDAC11Q96DB2 AC073648.6-201ENST00000641589 218 ntBASIC19.91■□□□□ 0.78
HDAC11Q96DB2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
HDAC11Q96DB2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
HDAC11Q96DB2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HDAC11Q96DB2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HDAC11Q96DB2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HDAC11Q96DB2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.91■□□□□ 0.78
HDAC11Q96DB2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms