Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.19■□□□□ 0.34
APH1AQ96BI3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APH1AQ96BI3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
APH1AQ96BI3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APH1AQ96BI3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.19■□□□□ 0.34
APH1AQ96BI3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
APH1AQ96BI3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
APH1AQ96BI3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
APH1AQ96BI3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APH1AQ96BI3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
APH1AQ96BI3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.19■□□□□ 0.34
APH1AQ96BI3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
APH1AQ96BI3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
APH1AQ96BI3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
APH1AQ96BI3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
APH1AQ96BI3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APH1AQ96BI3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.18■□□□□ 0.34
APH1AQ96BI3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.18■□□□□ 0.34
APH1AQ96BI3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
APH1AQ96BI3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
APH1AQ96BI3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
APH1AQ96BI3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
APH1AQ96BI3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
APH1AQ96BI3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APH1AQ96BI3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
APH1AQ96BI3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
APH1AQ96BI3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
APH1AQ96BI3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.18■□□□□ 0.34
APH1AQ96BI3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.18■□□□□ 0.34
APH1AQ96BI3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.18■□□□□ 0.34
APH1AQ96BI3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.18■□□□□ 0.34
APH1AQ96BI3 MIR4497-201ENST00000583208 89 ntBASIC17.18■□□□□ 0.34
APH1AQ96BI3 MIR4785-201ENST00000585005 73 ntBASIC17.18■□□□□ 0.34
APH1AQ96BI3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.18■□□□□ 0.34
APH1AQ96BI3 HLA-A-209ENST00000638375 975 ntBASIC17.18■□□□□ 0.34
APH1AQ96BI3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
APH1AQ96BI3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APH1AQ96BI3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
APH1AQ96BI3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APH1AQ96BI3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
APH1AQ96BI3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APH1AQ96BI3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
APH1AQ96BI3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APH1AQ96BI3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
APH1AQ96BI3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
APH1AQ96BI3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.18■□□□□ 0.34
APH1AQ96BI3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.18■□□□□ 0.34
APH1AQ96BI3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
APH1AQ96BI3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.17■□□□□ 0.34
APH1AQ96BI3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
APH1AQ96BI3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
APH1AQ96BI3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
APH1AQ96BI3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
APH1AQ96BI3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APH1AQ96BI3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
APH1AQ96BI3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APH1AQ96BI3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.17■□□□□ 0.34
APH1AQ96BI3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APH1AQ96BI3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.17■□□□□ 0.34
APH1AQ96BI3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APH1AQ96BI3 TSPY7P-201ENST00000431358 1114 ntBASIC17.17■□□□□ 0.34
APH1AQ96BI3 AL355355.2-201ENST00000442321 338 ntBASIC17.17■□□□□ 0.34
APH1AQ96BI3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APH1AQ96BI3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.17■□□□□ 0.34
APH1AQ96BI3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.17■□□□□ 0.34
APH1AQ96BI3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.17■□□□□ 0.34
APH1AQ96BI3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.17■□□□□ 0.34
APH1AQ96BI3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.17■□□□□ 0.34
APH1AQ96BI3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
APH1AQ96BI3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
APH1AQ96BI3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.17■□□□□ 0.34
APH1AQ96BI3 AC131212.4-201ENST00000623606 975 ntBASIC17.17■□□□□ 0.34
APH1AQ96BI3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APH1AQ96BI3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APH1AQ96BI3 KRT17P2-201ENST00000300992 1314 ntBASIC17.17■□□□□ 0.34
APH1AQ96BI3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
APH1AQ96BI3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.17■□□□□ 0.34
APH1AQ96BI3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.16■□□□□ 0.34
APH1AQ96BI3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
APH1AQ96BI3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APH1AQ96BI3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
APH1AQ96BI3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APH1AQ96BI3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
APH1AQ96BI3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APH1AQ96BI3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.16■□□□□ 0.34
APH1AQ96BI3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APH1AQ96BI3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
APH1AQ96BI3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
APH1AQ96BI3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APH1AQ96BI3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APH1AQ96BI3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APH1AQ96BI3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.16■□□□□ 0.34
APH1AQ96BI3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
APH1AQ96BI3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
APH1AQ96BI3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.16■□□□□ 0.34
APH1AQ96BI3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.16■□□□□ 0.34
APH1AQ96BI3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
APH1AQ96BI3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.16■□□□□ 0.34
APH1AQ96BI3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.16■□□□□ 0.34
APH1AQ96BI3 AL031985.4-201ENST00000642138 673 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms