Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF25Q96BH1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF25Q96BH1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF25Q96BH1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF25Q96BH1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF25Q96BH1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RNF25Q96BH1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF25Q96BH1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF25Q96BH1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF25Q96BH1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF25Q96BH1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF25Q96BH1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF25Q96BH1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
RNF25Q96BH1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF25Q96BH1 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF25Q96BH1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
RNF25Q96BH1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.34■□□□□ 0.85
RNF25Q96BH1 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.34■□□□□ 0.85
RNF25Q96BH1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
RNF25Q96BH1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RNF25Q96BH1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF25Q96BH1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF25Q96BH1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF25Q96BH1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF25Q96BH1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
RNF25Q96BH1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF25Q96BH1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
RNF25Q96BH1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF25Q96BH1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF25Q96BH1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF25Q96BH1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF25Q96BH1 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF25Q96BH1 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF25Q96BH1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF25Q96BH1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.33■□□□□ 0.85
RNF25Q96BH1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RNF25Q96BH1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.33■□□□□ 0.85
RNF25Q96BH1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF25Q96BH1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF25Q96BH1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.33■□□□□ 0.85
RNF25Q96BH1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
RNF25Q96BH1 AC083880.1-201ENST00000608266 535 ntBASIC20.33■□□□□ 0.85
RNF25Q96BH1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF25Q96BH1 HLA-B-256ENST00000639848 1089 ntBASIC20.33■□□□□ 0.85
RNF25Q96BH1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF25Q96BH1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.33■□□□□ 0.84
RNF25Q96BH1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF25Q96BH1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF25Q96BH1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RNF25Q96BH1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF25Q96BH1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF25Q96BH1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF25Q96BH1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF25Q96BH1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF25Q96BH1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RNF25Q96BH1 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF25Q96BH1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF25Q96BH1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF25Q96BH1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
RNF25Q96BH1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF25Q96BH1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF25Q96BH1 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF25Q96BH1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.32■□□□□ 0.84
RNF25Q96BH1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF25Q96BH1 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.32■□□□□ 0.84
RNF25Q96BH1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF25Q96BH1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF25Q96BH1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF25Q96BH1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF25Q96BH1 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF25Q96BH1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF25Q96BH1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF25Q96BH1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RNF25Q96BH1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RNF25Q96BH1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF25Q96BH1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RNF25Q96BH1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF25Q96BH1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF25Q96BH1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF25Q96BH1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF25Q96BH1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF25Q96BH1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.31■□□□□ 0.84
RNF25Q96BH1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF25Q96BH1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF25Q96BH1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF25Q96BH1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF25Q96BH1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF25Q96BH1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RNF25Q96BH1 PNMA6B-201ENST00000538162 1200 ntBASIC20.31■□□□□ 0.84
RNF25Q96BH1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF25Q96BH1 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF25Q96BH1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF25Q96BH1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RNF25Q96BH1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF25Q96BH1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF25Q96BH1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF25Q96BH1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF25Q96BH1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF25Q96BH1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RNF25Q96BH1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms