Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCAMP4Q969E2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCAMP4Q969E2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCAMP4Q969E2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SCAMP4Q969E2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.27■□□□□ 0.68
SCAMP4Q969E2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SCAMP4Q969E2 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCAMP4Q969E2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.27■□□□□ 0.68
SCAMP4Q969E2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCAMP4Q969E2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SCAMP4Q969E2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCAMP4Q969E2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCAMP4Q969E2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.27■□□□□ 0.68
SCAMP4Q969E2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SCAMP4Q969E2 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.27■□□□□ 0.68
SCAMP4Q969E2 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.27■□□□□ 0.68
SCAMP4Q969E2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCAMP4Q969E2 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.27■□□□□ 0.68
SCAMP4Q969E2 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCAMP4Q969E2 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.27■□□□□ 0.68
SCAMP4Q969E2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SCAMP4Q969E2 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.27■□□□□ 0.68
SCAMP4Q969E2 REXO1L10P-201ENST00000615707 1290 ntBASIC19.27■□□□□ 0.68
SCAMP4Q969E2 REXO1L12P-201ENST00000622156 912 ntBASIC19.27■□□□□ 0.68
SCAMP4Q969E2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCAMP4Q969E2 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCAMP4Q969E2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SCAMP4Q969E2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.27■□□□□ 0.67
SCAMP4Q969E2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.27■□□□□ 0.67
SCAMP4Q969E2 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.26■□□□□ 0.67
SCAMP4Q969E2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCAMP4Q969E2 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCAMP4Q969E2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCAMP4Q969E2 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCAMP4Q969E2 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.26■□□□□ 0.67
SCAMP4Q969E2 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.26■□□□□ 0.67
SCAMP4Q969E2 AL160286.2-201ENST00000567150 934 ntBASIC19.26■□□□□ 0.67
SCAMP4Q969E2 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.26■□□□□ 0.67
SCAMP4Q969E2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.26■□□□□ 0.67
SCAMP4Q969E2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCAMP4Q969E2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.26■□□□□ 0.67
SCAMP4Q969E2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.26■□□□□ 0.67
SCAMP4Q969E2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.26■□□□□ 0.67
SCAMP4Q969E2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.26■□□□□ 0.67
SCAMP4Q969E2 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCAMP4Q969E2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCAMP4Q969E2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SCAMP4Q969E2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCAMP4Q969E2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCAMP4Q969E2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCAMP4Q969E2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCAMP4Q969E2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCAMP4Q969E2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCAMP4Q969E2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCAMP4Q969E2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.25■□□□□ 0.67
SCAMP4Q969E2 MESTP1-201ENST00000404287 994 ntBASIC19.25■□□□□ 0.67
SCAMP4Q969E2 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.25■□□□□ 0.67
SCAMP4Q969E2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.25■□□□□ 0.67
SCAMP4Q969E2 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.25■□□□□ 0.67
SCAMP4Q969E2 AC011506.1-201ENST00000474329 610 ntBASIC19.25■□□□□ 0.67
SCAMP4Q969E2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SCAMP4Q969E2 AC116562.2-201ENST00000507042 360 ntBASIC19.25■□□□□ 0.67
SCAMP4Q969E2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.25■□□□□ 0.67
SCAMP4Q969E2 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.25■□□□□ 0.67
SCAMP4Q969E2 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCAMP4Q969E2 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.25■□□□□ 0.67
SCAMP4Q969E2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.25■□□□□ 0.67
SCAMP4Q969E2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.25■□□□□ 0.67
SCAMP4Q969E2 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.25■□□□□ 0.67
SCAMP4Q969E2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.25■□□□□ 0.67
SCAMP4Q969E2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SCAMP4Q969E2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCAMP4Q969E2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.25■□□□□ 0.67
SCAMP4Q969E2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.25■□□□□ 0.67
SCAMP4Q969E2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCAMP4Q969E2 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.25■□□□□ 0.67
SCAMP4Q969E2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCAMP4Q969E2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCAMP4Q969E2 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SCAMP4Q969E2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.24■□□□□ 0.67
SCAMP4Q969E2 Z85996.1-201ENST00000494644 937 ntBASIC19.24■□□□□ 0.67
SCAMP4Q969E2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.24■□□□□ 0.67
SCAMP4Q969E2 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.24■□□□□ 0.67
SCAMP4Q969E2 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
SCAMP4Q969E2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCAMP4Q969E2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SCAMP4Q969E2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.24■□□□□ 0.67
SCAMP4Q969E2 AC026271.3-201ENST00000571884 352 ntBASIC19.24■□□□□ 0.67
SCAMP4Q969E2 ZNF815P-204ENST00000434898 1737 ntBASIC19.24■□□□□ 0.67
SCAMP4Q969E2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCAMP4Q969E2 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
SCAMP4Q969E2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCAMP4Q969E2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCAMP4Q969E2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCAMP4Q969E2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SCAMP4Q969E2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.23■□□□□ 0.67
SCAMP4Q969E2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCAMP4Q969E2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.23■□□□□ 0.67
SCAMP4Q969E2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCAMP4Q969E2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms