Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 AC141586.3-201ENST00000562166 1838 ntBASIC19.31■□□□□ 0.68
RAB3IL1Q8TBN0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB3IL1Q8TBN0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.31■□□□□ 0.68
RAB3IL1Q8TBN0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB3IL1Q8TBN0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB3IL1Q8TBN0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RAB3IL1Q8TBN0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.31■□□□□ 0.68
RAB3IL1Q8TBN0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RAB3IL1Q8TBN0 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB3IL1Q8TBN0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RAB3IL1Q8TBN0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
RAB3IL1Q8TBN0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.31■□□□□ 0.68
RAB3IL1Q8TBN0 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 AC006333.2-201ENST00000607957 2099 ntBASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 MCRIP2P1-201ENST00000394346 511 ntBASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 YBX1P1-201ENST00000445822 960 ntBASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 AC007322.4-201ENST00000509611 723 ntBASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
RAB3IL1Q8TBN0 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RAB3IL1Q8TBN0 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RAB3IL1Q8TBN0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB3IL1Q8TBN0 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB3IL1Q8TBN0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB3IL1Q8TBN0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
RAB3IL1Q8TBN0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB3IL1Q8TBN0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RAB3IL1Q8TBN0 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RAB3IL1Q8TBN0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB3IL1Q8TBN0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB3IL1Q8TBN0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB3IL1Q8TBN0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB3IL1Q8TBN0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB3IL1Q8TBN0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RAB3IL1Q8TBN0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB3IL1Q8TBN0 MFSD11-216ENST00000590393 1141 ntBASIC19.29■□□□□ 0.68
RAB3IL1Q8TBN0 AC105020.6-201ENST00000621523 1217 ntBASIC19.29■□□□□ 0.68
RAB3IL1Q8TBN0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB3IL1Q8TBN0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RAB3IL1Q8TBN0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB3IL1Q8TBN0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB3IL1Q8TBN0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB3IL1Q8TBN0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RAB3IL1Q8TBN0 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB3IL1Q8TBN0 LETM1P2-201ENST00000597330 2178 ntBASIC19.29■□□□□ 0.68
RAB3IL1Q8TBN0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RAB3IL1Q8TBN0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RAB3IL1Q8TBN0 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB3IL1Q8TBN0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB3IL1Q8TBN0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB3IL1Q8TBN0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB3IL1Q8TBN0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB3IL1Q8TBN0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB3IL1Q8TBN0 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RAB3IL1Q8TBN0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RAB3IL1Q8TBN0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB3IL1Q8TBN0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB3IL1Q8TBN0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB3IL1Q8TBN0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.28■□□□□ 0.68
RAB3IL1Q8TBN0 AC023632.3-201ENST00000521633 145 ntBASIC19.28■□□□□ 0.68
RAB3IL1Q8TBN0 KRT18P14-201ENST00000534205 1250 ntBASIC19.28■□□□□ 0.68
RAB3IL1Q8TBN0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.28■□□□□ 0.68
RAB3IL1Q8TBN0 AC010536.3-201ENST00000620306 533 ntBASIC19.28■□□□□ 0.68
RAB3IL1Q8TBN0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB3IL1Q8TBN0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB3IL1Q8TBN0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RAB3IL1Q8TBN0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB3IL1Q8TBN0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
RAB3IL1Q8TBN0 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RAB3IL1Q8TBN0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB3IL1Q8TBN0 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
RAB3IL1Q8TBN0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RAB3IL1Q8TBN0 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms