Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LMO3Q8TAP4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LMO3Q8TAP4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.81■□□□□ 0.92
LMO3Q8TAP4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LMO3Q8TAP4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LMO3Q8TAP4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.81■□□□□ 0.92
LMO3Q8TAP4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
LMO3Q8TAP4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LMO3Q8TAP4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.81■□□□□ 0.92
LMO3Q8TAP4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
LMO3Q8TAP4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LMO3Q8TAP4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
LMO3Q8TAP4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.81■□□□□ 0.92
LMO3Q8TAP4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
LMO3Q8TAP4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.81■□□□□ 0.92
LMO3Q8TAP4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LMO3Q8TAP4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.8■□□□□ 0.92
LMO3Q8TAP4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
LMO3Q8TAP4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LMO3Q8TAP4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LMO3Q8TAP4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LMO3Q8TAP4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LMO3Q8TAP4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.8■□□□□ 0.92
LMO3Q8TAP4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.8■□□□□ 0.92
LMO3Q8TAP4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.8■□□□□ 0.92
LMO3Q8TAP4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LMO3Q8TAP4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.8■□□□□ 0.92
LMO3Q8TAP4 AL049812.1-201ENST00000432563 2267 ntBASIC20.8■□□□□ 0.92
LMO3Q8TAP4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LMO3Q8TAP4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LMO3Q8TAP4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
LMO3Q8TAP4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
LMO3Q8TAP4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
LMO3Q8TAP4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LMO3Q8TAP4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.79■□□□□ 0.92
LMO3Q8TAP4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
LMO3Q8TAP4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LMO3Q8TAP4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
LMO3Q8TAP4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
LMO3Q8TAP4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LMO3Q8TAP4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.79■□□□□ 0.92
LMO3Q8TAP4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LMO3Q8TAP4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LMO3Q8TAP4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.79■□□□□ 0.92
LMO3Q8TAP4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.79■□□□□ 0.92
LMO3Q8TAP4 ITM2C-210ENST00000620962 501 ntBASIC20.79■□□□□ 0.92
LMO3Q8TAP4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
LMO3Q8TAP4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LMO3Q8TAP4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LMO3Q8TAP4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LMO3Q8TAP4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LMO3Q8TAP4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LMO3Q8TAP4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LMO3Q8TAP4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
LMO3Q8TAP4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LMO3Q8TAP4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LMO3Q8TAP4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LMO3Q8TAP4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LMO3Q8TAP4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LMO3Q8TAP4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
LMO3Q8TAP4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LMO3Q8TAP4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LMO3Q8TAP4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LMO3Q8TAP4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LMO3Q8TAP4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.78■□□□□ 0.92
LMO3Q8TAP4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LMO3Q8TAP4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LMO3Q8TAP4 RPPH1-201ENST00000516869 333 ntBASIC20.78■□□□□ 0.92
LMO3Q8TAP4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.78■□□□□ 0.92
LMO3Q8TAP4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.78■□□□□ 0.92
LMO3Q8TAP4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.78■□□□□ 0.92
LMO3Q8TAP4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.78■□□□□ 0.92
LMO3Q8TAP4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
LMO3Q8TAP4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.78■□□□□ 0.92
LMO3Q8TAP4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LMO3Q8TAP4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
LMO3Q8TAP4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
LMO3Q8TAP4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LMO3Q8TAP4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LMO3Q8TAP4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LMO3Q8TAP4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LMO3Q8TAP4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.78■□□□□ 0.92
LMO3Q8TAP4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.77■□□□□ 0.92
LMO3Q8TAP4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.77■□□□□ 0.92
LMO3Q8TAP4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LMO3Q8TAP4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
LMO3Q8TAP4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
LMO3Q8TAP4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.77■□□□□ 0.92
LMO3Q8TAP4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
LMO3Q8TAP4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.77■□□□□ 0.92
LMO3Q8TAP4 C1QBPP2-201ENST00000528754 825 ntBASIC20.77■□□□□ 0.92
LMO3Q8TAP4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
LMO3Q8TAP4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
LMO3Q8TAP4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
LMO3Q8TAP4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
LMO3Q8TAP4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LMO3Q8TAP4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LMO3Q8TAP4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
LMO3Q8TAP4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.76■□□□□ 0.91
LMO3Q8TAP4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms