Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH19Q8TAB3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH19Q8TAB3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH19Q8TAB3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH19Q8TAB3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDH19Q8TAB3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDH19Q8TAB3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.02■□□□□ 0.8
PCDH19Q8TAB3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDH19Q8TAB3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
PCDH19Q8TAB3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH19Q8TAB3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH19Q8TAB3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDH19Q8TAB3 TEX21P-204ENST00000641479 1693 ntBASIC20.02■□□□□ 0.8
PCDH19Q8TAB3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH19Q8TAB3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH19Q8TAB3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH19Q8TAB3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH19Q8TAB3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
PCDH19Q8TAB3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.02■□□□□ 0.79
PCDH19Q8TAB3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDH19Q8TAB3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDH19Q8TAB3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH19Q8TAB3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDH19Q8TAB3 BX323043.1-201ENST00000641006 1765 ntBASIC20.01■□□□□ 0.79
PCDH19Q8TAB3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDH19Q8TAB3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
PCDH19Q8TAB3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH19Q8TAB3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH19Q8TAB3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH19Q8TAB3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH19Q8TAB3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH19Q8TAB3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH19Q8TAB3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDH19Q8TAB3 AL023875.1-201ENST00000640777 796 ntBASIC20.01■□□□□ 0.79
PCDH19Q8TAB3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDH19Q8TAB3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH19Q8TAB3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH19Q8TAB3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH19Q8TAB3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH19Q8TAB3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH19Q8TAB3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20■□□□□ 0.79
PCDH19Q8TAB3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH19Q8TAB3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20■□□□□ 0.79
PCDH19Q8TAB3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH19Q8TAB3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20■□□□□ 0.79
PCDH19Q8TAB3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH19Q8TAB3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PCDH19Q8TAB3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH19Q8TAB3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH19Q8TAB3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20■□□□□ 0.79
PCDH19Q8TAB3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20■□□□□ 0.79
PCDH19Q8TAB3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20■□□□□ 0.79
PCDH19Q8TAB3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH19Q8TAB3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
PCDH19Q8TAB3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH19Q8TAB3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20■□□□□ 0.79
PCDH19Q8TAB3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH19Q8TAB3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20■□□□□ 0.79
PCDH19Q8TAB3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PCDH19Q8TAB3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH19Q8TAB3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH19Q8TAB3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PCDH19Q8TAB3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDH19Q8TAB3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
PCDH19Q8TAB3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PCDH19Q8TAB3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH19Q8TAB3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.99■□□□□ 0.79
PCDH19Q8TAB3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH19Q8TAB3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH19Q8TAB3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH19Q8TAB3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH19Q8TAB3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDH19Q8TAB3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
PCDH19Q8TAB3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH19Q8TAB3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH19Q8TAB3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PCDH19Q8TAB3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
PCDH19Q8TAB3 AP006294.2-201ENST00000641667 209 ntBASIC19.99■□□□□ 0.79
PCDH19Q8TAB3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
PCDH19Q8TAB3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH19Q8TAB3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDH19Q8TAB3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
PCDH19Q8TAB3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH19Q8TAB3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH19Q8TAB3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH19Q8TAB3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH19Q8TAB3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH19Q8TAB3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH19Q8TAB3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDH19Q8TAB3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH19Q8TAB3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH19Q8TAB3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH19Q8TAB3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH19Q8TAB3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH19Q8TAB3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDH19Q8TAB3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDH19Q8TAB3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.98■□□□□ 0.79
PCDH19Q8TAB3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.98■□□□□ 0.79
PCDH19Q8TAB3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
PCDH19Q8TAB3 RN7SL471P-201ENST00000580476 299 ntBASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms