Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.25■□□□□ 0.51
SIMC1Q8NDZ2 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.25■□□□□ 0.51
SIMC1Q8NDZ2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIMC1Q8NDZ2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIMC1Q8NDZ2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SIMC1Q8NDZ2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
SIMC1Q8NDZ2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SIMC1Q8NDZ2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SIMC1Q8NDZ2 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIMC1Q8NDZ2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SIMC1Q8NDZ2 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIMC1Q8NDZ2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIMC1Q8NDZ2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SIMC1Q8NDZ2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.25■□□□□ 0.51
SIMC1Q8NDZ2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
SIMC1Q8NDZ2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SIMC1Q8NDZ2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.24■□□□□ 0.51
SIMC1Q8NDZ2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.24■□□□□ 0.51
SIMC1Q8NDZ2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SIMC1Q8NDZ2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SIMC1Q8NDZ2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIMC1Q8NDZ2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SIMC1Q8NDZ2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.24■□□□□ 0.51
SIMC1Q8NDZ2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIMC1Q8NDZ2 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIMC1Q8NDZ2 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIMC1Q8NDZ2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.24■□□□□ 0.51
SIMC1Q8NDZ2 AC093827.2-201ENST00000512654 315 ntBASIC18.24■□□□□ 0.51
SIMC1Q8NDZ2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
SIMC1Q8NDZ2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SIMC1Q8NDZ2 RN7SL471P-201ENST00000580476 299 ntBASIC18.24■□□□□ 0.51
SIMC1Q8NDZ2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIMC1Q8NDZ2 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.24■□□□□ 0.51
SIMC1Q8NDZ2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.24■□□□□ 0.51
SIMC1Q8NDZ2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.24■□□□□ 0.51
SIMC1Q8NDZ2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SIMC1Q8NDZ2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SIMC1Q8NDZ2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SIMC1Q8NDZ2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIMC1Q8NDZ2 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIMC1Q8NDZ2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.23■□□□□ 0.51
SIMC1Q8NDZ2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SIMC1Q8NDZ2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.22■□□□□ 0.51
SIMC1Q8NDZ2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIMC1Q8NDZ2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SIMC1Q8NDZ2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIMC1Q8NDZ2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SIMC1Q8NDZ2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SIMC1Q8NDZ2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
SIMC1Q8NDZ2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIMC1Q8NDZ2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIMC1Q8NDZ2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIMC1Q8NDZ2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
SIMC1Q8NDZ2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SIMC1Q8NDZ2 PRORSD1P-201ENST00000295112 541 ntBASIC18.22■□□□□ 0.51
SIMC1Q8NDZ2 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIMC1Q8NDZ2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIMC1Q8NDZ2 KRASP1-201ENST00000407852 552 ntBASIC18.22■□□□□ 0.51
SIMC1Q8NDZ2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SIMC1Q8NDZ2 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.22■□□□□ 0.51
SIMC1Q8NDZ2 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.22■□□□□ 0.51
SIMC1Q8NDZ2 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.22■□□□□ 0.51
SIMC1Q8NDZ2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.22■□□□□ 0.51
SIMC1Q8NDZ2 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.22■□□□□ 0.51
SIMC1Q8NDZ2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms