Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 AL691432.2-201ENST00000607222 2038 ntBASIC21.1■□□□□ 0.97
RNF169Q8NCN4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF169Q8NCN4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF169Q8NCN4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF169Q8NCN4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RNF169Q8NCN4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RNF169Q8NCN4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.09■□□□□ 0.97
RNF169Q8NCN4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RNF169Q8NCN4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.09■□□□□ 0.97
RNF169Q8NCN4 AC104076.2-201ENST00000448912 469 ntBASIC21.09■□□□□ 0.97
RNF169Q8NCN4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RNF169Q8NCN4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF169Q8NCN4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.09■□□□□ 0.97
RNF169Q8NCN4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.09■□□□□ 0.97
RNF169Q8NCN4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF169Q8NCN4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF169Q8NCN4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.08■□□□□ 0.97
RNF169Q8NCN4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF169Q8NCN4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RNF169Q8NCN4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF169Q8NCN4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF169Q8NCN4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.08■□□□□ 0.97
RNF169Q8NCN4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF169Q8NCN4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF169Q8NCN4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF169Q8NCN4 DUX4L26-201ENST00000489078 1255 ntBASIC21.08■□□□□ 0.97
RNF169Q8NCN4 Z85996.1-201ENST00000494644 937 ntBASIC21.08■□□□□ 0.97
RNF169Q8NCN4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.08■□□□□ 0.97
RNF169Q8NCN4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
RNF169Q8NCN4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF169Q8NCN4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.08■□□□□ 0.96
RNF169Q8NCN4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RNF169Q8NCN4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
RNF169Q8NCN4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF169Q8NCN4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF169Q8NCN4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RNF169Q8NCN4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RNF169Q8NCN4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RNF169Q8NCN4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF169Q8NCN4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
RNF169Q8NCN4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF169Q8NCN4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.07■□□□□ 0.96
RNF169Q8NCN4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF169Q8NCN4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF169Q8NCN4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
RNF169Q8NCN4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
RNF169Q8NCN4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF169Q8NCN4 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF169Q8NCN4 FAM87A-204ENST00000613235 858 ntBASIC21.07■□□□□ 0.96
RNF169Q8NCN4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF169Q8NCN4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF169Q8NCN4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF169Q8NCN4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF169Q8NCN4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF169Q8NCN4 LINC01006-201ENST00000333319 2292 ntBASIC21.07■□□□□ 0.96
RNF169Q8NCN4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF169Q8NCN4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF169Q8NCN4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
RNF169Q8NCN4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF169Q8NCN4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF169Q8NCN4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RNF169Q8NCN4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF169Q8NCN4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF169Q8NCN4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF169Q8NCN4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
RNF169Q8NCN4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF169Q8NCN4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF169Q8NCN4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF169Q8NCN4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF169Q8NCN4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
RNF169Q8NCN4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF169Q8NCN4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RNF169Q8NCN4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF169Q8NCN4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.06■□□□□ 0.96
RNF169Q8NCN4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.06■□□□□ 0.96
RNF169Q8NCN4 AL160286.2-201ENST00000567150 934 ntBASIC21.06■□□□□ 0.96
RNF169Q8NCN4 NTF6B-201ENST00000591913 560 ntBASIC21.06■□□□□ 0.96
RNF169Q8NCN4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF169Q8NCN4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RNF169Q8NCN4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF169Q8NCN4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.06■□□□□ 0.96
RNF169Q8NCN4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF169Q8NCN4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF169Q8NCN4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF169Q8NCN4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF169Q8NCN4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RNF169Q8NCN4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF169Q8NCN4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF169Q8NCN4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF169Q8NCN4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF169Q8NCN4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RNF169Q8NCN4 AC116562.4-202ENST00000641738 218 ntBASIC21.05■□□□□ 0.96
RNF169Q8NCN4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RNF169Q8NCN4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF169Q8NCN4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF169Q8NCN4 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
RNF169Q8NCN4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF169Q8NCN4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF169Q8NCN4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF169Q8NCN4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms