Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SLC38A9Q8NBW4 KRT8P41-201ENST00000533985 1514 ntBASIC18.29■□□□□ 0.52
SLC38A9Q8NBW4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC38A9Q8NBW4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SLC38A9Q8NBW4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC38A9Q8NBW4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC38A9Q8NBW4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC38A9Q8NBW4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC38A9Q8NBW4 AC104076.2-201ENST00000448912 469 ntBASIC18.29■□□□□ 0.52
SLC38A9Q8NBW4 KRT18P35-201ENST00000510488 1269 ntBASIC18.29■□□□□ 0.52
SLC38A9Q8NBW4 AL049597.2-201ENST00000565575 961 ntBASIC18.29■□□□□ 0.52
SLC38A9Q8NBW4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC38A9Q8NBW4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
SLC38A9Q8NBW4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC38A9Q8NBW4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC38A9Q8NBW4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC38A9Q8NBW4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC38A9Q8NBW4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SLC38A9Q8NBW4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SLC38A9Q8NBW4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC38A9Q8NBW4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.29■□□□□ 0.52
SLC38A9Q8NBW4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SLC38A9Q8NBW4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC38A9Q8NBW4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC38A9Q8NBW4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC38A9Q8NBW4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC38A9Q8NBW4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC38A9Q8NBW4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC38A9Q8NBW4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC38A9Q8NBW4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC38A9Q8NBW4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SLC38A9Q8NBW4 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.28■□□□□ 0.52
SLC38A9Q8NBW4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC38A9Q8NBW4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.28■□□□□ 0.52
SLC38A9Q8NBW4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC38A9Q8NBW4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.28■□□□□ 0.52
SLC38A9Q8NBW4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC38A9Q8NBW4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC38A9Q8NBW4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC38A9Q8NBW4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC38A9Q8NBW4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.27■□□□□ 0.52
SLC38A9Q8NBW4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.27■□□□□ 0.52
SLC38A9Q8NBW4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC38A9Q8NBW4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.27■□□□□ 0.52
SLC38A9Q8NBW4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC38A9Q8NBW4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.27■□□□□ 0.52
SLC38A9Q8NBW4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC38A9Q8NBW4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC38A9Q8NBW4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC38A9Q8NBW4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC38A9Q8NBW4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC38A9Q8NBW4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
SLC38A9Q8NBW4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
SLC38A9Q8NBW4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.27■□□□□ 0.52
SLC38A9Q8NBW4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SLC38A9Q8NBW4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SLC38A9Q8NBW4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.52
SLC38A9Q8NBW4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC38A9Q8NBW4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC38A9Q8NBW4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC38A9Q8NBW4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SLC38A9Q8NBW4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
SLC38A9Q8NBW4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SLC38A9Q8NBW4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.27■□□□□ 0.51
SLC38A9Q8NBW4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
SLC38A9Q8NBW4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SLC38A9Q8NBW4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SLC38A9Q8NBW4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC38A9Q8NBW4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC38A9Q8NBW4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SLC38A9Q8NBW4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SLC38A9Q8NBW4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.26■□□□□ 0.51
SLC38A9Q8NBW4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC38A9Q8NBW4 AC128688.1-201ENST00000487626 519 ntBASIC18.26■□□□□ 0.51
SLC38A9Q8NBW4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.26■□□□□ 0.51
SLC38A9Q8NBW4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC38A9Q8NBW4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SLC38A9Q8NBW4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.26■□□□□ 0.51
SLC38A9Q8NBW4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SLC38A9Q8NBW4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
SLC38A9Q8NBW4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC38A9Q8NBW4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC38A9Q8NBW4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC38A9Q8NBW4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC38A9Q8NBW4 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.26■□□□□ 0.51
SLC38A9Q8NBW4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SLC38A9Q8NBW4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC38A9Q8NBW4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SLC38A9Q8NBW4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SLC38A9Q8NBW4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC38A9Q8NBW4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC38A9Q8NBW4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC38A9Q8NBW4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
SLC38A9Q8NBW4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC38A9Q8NBW4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
SLC38A9Q8NBW4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.25■□□□□ 0.51
SLC38A9Q8NBW4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.25■□□□□ 0.51
SLC38A9Q8NBW4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.25■□□□□ 0.51
SLC38A9Q8NBW4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC38A9Q8NBW4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms