Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC01555Q8NAE3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC01555Q8NAE3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
LINC01555Q8NAE3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
LINC01555Q8NAE3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
LINC01555Q8NAE3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
LINC01555Q8NAE3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LINC01555Q8NAE3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LINC01555Q8NAE3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.68■□□□□ 0.58
LINC01555Q8NAE3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.68■□□□□ 0.58
LINC01555Q8NAE3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.68■□□□□ 0.58
LINC01555Q8NAE3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.68■□□□□ 0.58
LINC01555Q8NAE3 AP003071.4-201ENST00000562276 1284 ntBASIC18.68■□□□□ 0.58
LINC01555Q8NAE3 MIR4785-201ENST00000585005 73 ntBASIC18.68■□□□□ 0.58
LINC01555Q8NAE3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.68■□□□□ 0.58
LINC01555Q8NAE3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.68■□□□□ 0.58
LINC01555Q8NAE3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.68■□□□□ 0.58
LINC01555Q8NAE3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC01555Q8NAE3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LINC01555Q8NAE3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC01555Q8NAE3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC01555Q8NAE3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LINC01555Q8NAE3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
LINC01555Q8NAE3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC01555Q8NAE3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LINC01555Q8NAE3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC01555Q8NAE3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC01555Q8NAE3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.67■□□□□ 0.58
LINC01555Q8NAE3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC01555Q8NAE3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC01555Q8NAE3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC01555Q8NAE3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.67■□□□□ 0.58
LINC01555Q8NAE3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
LINC01555Q8NAE3 AL355355.2-201ENST00000442321 338 ntBASIC18.67■□□□□ 0.58
LINC01555Q8NAE3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.67■□□□□ 0.58
LINC01555Q8NAE3 AC011506.1-201ENST00000474329 610 ntBASIC18.67■□□□□ 0.58
LINC01555Q8NAE3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.67■□□□□ 0.58
LINC01555Q8NAE3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.67■□□□□ 0.58
LINC01555Q8NAE3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LINC01555Q8NAE3 REXO1L10P-201ENST00000615707 1290 ntBASIC18.67■□□□□ 0.58
LINC01555Q8NAE3 REXO1L12P-201ENST00000622156 912 ntBASIC18.67■□□□□ 0.58
LINC01555Q8NAE3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC01555Q8NAE3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC01555Q8NAE3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC01555Q8NAE3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC01555Q8NAE3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.67■□□□□ 0.58
LINC01555Q8NAE3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.67■□□□□ 0.58
LINC01555Q8NAE3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC01555Q8NAE3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC01555Q8NAE3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC01555Q8NAE3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LINC01555Q8NAE3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LINC01555Q8NAE3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LINC01555Q8NAE3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LINC01555Q8NAE3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.66■□□□□ 0.58
LINC01555Q8NAE3 KRT8P41-201ENST00000533985 1514 ntBASIC18.66■□□□□ 0.58
LINC01555Q8NAE3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.66■□□□□ 0.58
LINC01555Q8NAE3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LINC01555Q8NAE3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LINC01555Q8NAE3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LINC01555Q8NAE3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.66■□□□□ 0.58
LINC01555Q8NAE3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
LINC01555Q8NAE3 B3GAT3P1-201ENST00000471720 806 ntBASIC18.66■□□□□ 0.58
LINC01555Q8NAE3 AC116562.2-201ENST00000507042 360 ntBASIC18.66■□□□□ 0.58
LINC01555Q8NAE3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.66■□□□□ 0.58
LINC01555Q8NAE3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.66■□□□□ 0.58
LINC01555Q8NAE3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.66■□□□□ 0.58
LINC01555Q8NAE3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.66■□□□□ 0.58
LINC01555Q8NAE3 RCC2P6-201ENST00000526625 1557 ntBASIC18.66■□□□□ 0.58
LINC01555Q8NAE3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LINC01555Q8NAE3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LINC01555Q8NAE3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.66■□□□□ 0.58
LINC01555Q8NAE3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LINC01555Q8NAE3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LINC01555Q8NAE3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 AC093484.2-201ENST00000580996 2166 ntBASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 TSPY15P-201ENST00000457163 923 ntBASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 AC008040.2-201ENST00000461049 708 ntBASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 MIR6786-201ENST00000616843 113 ntBASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms