Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.14■□□□□ 0.17
CCDC71LQ8N9Z2 AC105020.6-201ENST00000621523 1217 ntBASIC16.14■□□□□ 0.17
CCDC71LQ8N9Z2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CCDC71LQ8N9Z2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.14■□□□□ 0.17
CCDC71LQ8N9Z2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC71LQ8N9Z2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CCDC71LQ8N9Z2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.14■□□□□ 0.17
CCDC71LQ8N9Z2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CCDC71LQ8N9Z2 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC71LQ8N9Z2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC71LQ8N9Z2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC71LQ8N9Z2 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC71LQ8N9Z2 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 AC141586.3-201ENST00000562166 1838 ntBASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 AC010536.3-201ENST00000620306 533 ntBASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CCDC71LQ8N9Z2 AC005082.1-201ENST00000413042 2259 ntBASIC16.12■□□□□ 0.17
CCDC71LQ8N9Z2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC71LQ8N9Z2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC71LQ8N9Z2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC71LQ8N9Z2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.12■□□□□ 0.17
CCDC71LQ8N9Z2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CCDC71LQ8N9Z2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC71LQ8N9Z2 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC71LQ8N9Z2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CCDC71LQ8N9Z2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CCDC71LQ8N9Z2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC71LQ8N9Z2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CCDC71LQ8N9Z2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CCDC71LQ8N9Z2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC71LQ8N9Z2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CCDC71LQ8N9Z2 AC007322.4-201ENST00000509611 723 ntBASIC16.12■□□□□ 0.17
CCDC71LQ8N9Z2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC71LQ8N9Z2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CCDC71LQ8N9Z2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CCDC71LQ8N9Z2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC71LQ8N9Z2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
CCDC71LQ8N9Z2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.12■□□□□ 0.17
CCDC71LQ8N9Z2 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC71LQ8N9Z2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC71LQ8N9Z2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC71LQ8N9Z2 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC71LQ8N9Z2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.12■□□□□ 0.17
CCDC71LQ8N9Z2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC71LQ8N9Z2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC71LQ8N9Z2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC71LQ8N9Z2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC71LQ8N9Z2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC71LQ8N9Z2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC71LQ8N9Z2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CCDC71LQ8N9Z2 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CCDC71LQ8N9Z2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC71LQ8N9Z2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.11■□□□□ 0.17
CCDC71LQ8N9Z2 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC71LQ8N9Z2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC71LQ8N9Z2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.11■□□□□ 0.17
CCDC71LQ8N9Z2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.11■□□□□ 0.17
CCDC71LQ8N9Z2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CCDC71LQ8N9Z2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC71LQ8N9Z2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.11■□□□□ 0.17
CCDC71LQ8N9Z2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC71LQ8N9Z2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC71LQ8N9Z2 AC023632.3-201ENST00000521633 145 ntBASIC16.11■□□□□ 0.17
CCDC71LQ8N9Z2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.11■□□□□ 0.17
CCDC71LQ8N9Z2 AC016405.3-201ENST00000607710 860 ntBASIC16.11■□□□□ 0.17
CCDC71LQ8N9Z2 AC013268.1-206ENST00000638368 961 ntBASIC16.11■□□□□ 0.17
CCDC71LQ8N9Z2 AC112229.1-201ENST00000639295 961 ntBASIC16.11■□□□□ 0.17
CCDC71LQ8N9Z2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC71LQ8N9Z2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC71LQ8N9Z2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC71LQ8N9Z2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms