Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AL445675.2-201ENST00000620291 557 ntBASIC20.55■□□□□ 0.88
RNF135Q8IUD6 AL691432.3-201ENST00000621860 400 ntBASIC20.55■□□□□ 0.88
RNF135Q8IUD6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF135Q8IUD6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF135Q8IUD6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF135Q8IUD6 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF135Q8IUD6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF135Q8IUD6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF135Q8IUD6 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF135Q8IUD6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF135Q8IUD6 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF135Q8IUD6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF135Q8IUD6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF135Q8IUD6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
RNF135Q8IUD6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.54■□□□□ 0.88
RNF135Q8IUD6 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF135Q8IUD6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF135Q8IUD6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF135Q8IUD6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF135Q8IUD6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF135Q8IUD6 COX11P1-201ENST00000489116 835 ntBASIC20.54■□□□□ 0.88
RNF135Q8IUD6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.54■□□□□ 0.88
RNF135Q8IUD6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.54■□□□□ 0.88
RNF135Q8IUD6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
RNF135Q8IUD6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF135Q8IUD6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.54■□□□□ 0.88
RNF135Q8IUD6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF135Q8IUD6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF135Q8IUD6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF135Q8IUD6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF135Q8IUD6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF135Q8IUD6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RNF135Q8IUD6 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF135Q8IUD6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RNF135Q8IUD6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF135Q8IUD6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF135Q8IUD6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF135Q8IUD6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RNF135Q8IUD6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF135Q8IUD6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF135Q8IUD6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF135Q8IUD6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RNF135Q8IUD6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RNF135Q8IUD6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF135Q8IUD6 AC073314.1-201ENST00000568729 2216 ntBASIC20.53■□□□□ 0.88
RNF135Q8IUD6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF135Q8IUD6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF135Q8IUD6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.52■□□□□ 0.88
RNF135Q8IUD6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF135Q8IUD6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF135Q8IUD6 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF135Q8IUD6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.52■□□□□ 0.88
RNF135Q8IUD6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF135Q8IUD6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF135Q8IUD6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF135Q8IUD6 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF135Q8IUD6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.52■□□□□ 0.88
RNF135Q8IUD6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RNF135Q8IUD6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.52■□□□□ 0.88
RNF135Q8IUD6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RNF135Q8IUD6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF135Q8IUD6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF135Q8IUD6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.52■□□□□ 0.88
RNF135Q8IUD6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF135Q8IUD6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF135Q8IUD6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF135Q8IUD6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RNF135Q8IUD6 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RNF135Q8IUD6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF135Q8IUD6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF135Q8IUD6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF135Q8IUD6 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.51■□□□□ 0.87
RNF135Q8IUD6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RNF135Q8IUD6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RNF135Q8IUD6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF135Q8IUD6 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RNF135Q8IUD6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF135Q8IUD6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.51■□□□□ 0.87
RNF135Q8IUD6 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.51■□□□□ 0.87
RNF135Q8IUD6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RNF135Q8IUD6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.51■□□□□ 0.87
RNF135Q8IUD6 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.51■□□□□ 0.87
RNF135Q8IUD6 SLC25A1P4-201ENST00000567977 778 ntBASIC20.51■□□□□ 0.87
RNF135Q8IUD6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RNF135Q8IUD6 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RNF135Q8IUD6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.51■□□□□ 0.87
RNF135Q8IUD6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF135Q8IUD6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF135Q8IUD6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RNF135Q8IUD6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.51■□□□□ 0.87
RNF135Q8IUD6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF135Q8IUD6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RNF135Q8IUD6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RNF135Q8IUD6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF135Q8IUD6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF135Q8IUD6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.5■□□□□ 0.87
RNF135Q8IUD6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RNF135Q8IUD6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF135Q8IUD6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RNF135Q8IUD6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms