Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALYREFQ86V81 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ALYREFQ86V81 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALYREFQ86V81 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ALYREFQ86V81 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.29■□□□□ 0.84
ALYREFQ86V81 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALYREFQ86V81 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
ALYREFQ86V81 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ALYREFQ86V81 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ALYREFQ86V81 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.28■□□□□ 0.84
ALYREFQ86V81 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ALYREFQ86V81 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
ALYREFQ86V81 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
ALYREFQ86V81 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ALYREFQ86V81 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.28■□□□□ 0.84
ALYREFQ86V81 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.28■□□□□ 0.84
ALYREFQ86V81 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ALYREFQ86V81 PGM5P4-201ENST00000421970 445 ntBASIC20.28■□□□□ 0.84
ALYREFQ86V81 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.28■□□□□ 0.84
ALYREFQ86V81 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.28■□□□□ 0.84
ALYREFQ86V81 AC092647.4-201ENST00000457211 535 ntBASIC20.28■□□□□ 0.84
ALYREFQ86V81 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.28■□□□□ 0.84
ALYREFQ86V81 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ALYREFQ86V81 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.28■□□□□ 0.84
ALYREFQ86V81 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.28■□□□□ 0.84
ALYREFQ86V81 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.28■□□□□ 0.84
ALYREFQ86V81 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ALYREFQ86V81 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
ALYREFQ86V81 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.27■□□□□ 0.84
ALYREFQ86V81 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ALYREFQ86V81 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.27■□□□□ 0.84
ALYREFQ86V81 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ALYREFQ86V81 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ALYREFQ86V81 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ALYREFQ86V81 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
ALYREFQ86V81 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ALYREFQ86V81 FP700111.2-201ENST00000619190 1892 ntBASIC20.27■□□□□ 0.84
ALYREFQ86V81 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ALYREFQ86V81 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ALYREFQ86V81 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.27■□□□□ 0.84
ALYREFQ86V81 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
ALYREFQ86V81 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ALYREFQ86V81 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ALYREFQ86V81 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ALYREFQ86V81 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ALYREFQ86V81 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.27■□□□□ 0.84
ALYREFQ86V81 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ALYREFQ86V81 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ALYREFQ86V81 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.27■□□□□ 0.84
ALYREFQ86V81 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
ALYREFQ86V81 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
ALYREFQ86V81 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
ALYREFQ86V81 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.27■□□□□ 0.84
ALYREFQ86V81 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ALYREFQ86V81 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ALYREFQ86V81 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
ALYREFQ86V81 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.83
ALYREFQ86V81 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ALYREFQ86V81 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.27■□□□□ 0.83
ALYREFQ86V81 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
ALYREFQ86V81 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ALYREFQ86V81 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
ALYREFQ86V81 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ALYREFQ86V81 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
ALYREFQ86V81 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ALYREFQ86V81 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ALYREFQ86V81 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ALYREFQ86V81 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.26■□□□□ 0.83
ALYREFQ86V81 AL845331.1-201ENST00000424978 1190 ntBASIC20.26■□□□□ 0.83
ALYREFQ86V81 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.26■□□□□ 0.83
ALYREFQ86V81 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC20.26■□□□□ 0.83
ALYREFQ86V81 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ALYREFQ86V81 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.26■□□□□ 0.83
ALYREFQ86V81 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.26■□□□□ 0.83
ALYREFQ86V81 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.26■□□□□ 0.83
ALYREFQ86V81 AC139887.4-201ENST00000607877 719 ntBASIC20.26■□□□□ 0.83
ALYREFQ86V81 AC069148.1-201ENST00000608741 768 ntBASIC20.26■□□□□ 0.83
ALYREFQ86V81 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.26■□□□□ 0.83
ALYREFQ86V81 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.26■□□□□ 0.83
ALYREFQ86V81 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.26■□□□□ 0.83
ALYREFQ86V81 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
ALYREFQ86V81 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ALYREFQ86V81 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ALYREFQ86V81 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
ALYREFQ86V81 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ALYREFQ86V81 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.26■□□□□ 0.83
ALYREFQ86V81 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ALYREFQ86V81 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.26■□□□□ 0.83
ALYREFQ86V81 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ALYREFQ86V81 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ALYREFQ86V81 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.25■□□□□ 0.83
ALYREFQ86V81 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.25■□□□□ 0.83
ALYREFQ86V81 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ALYREFQ86V81 AC061975.6-201ENST00000579045 1553 ntBASIC20.25■□□□□ 0.83
ALYREFQ86V81 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
ALYREFQ86V81 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ALYREFQ86V81 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ALYREFQ86V81 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ALYREFQ86V81 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ALYREFQ86V81 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms