Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.49■□□□□ 0.71
LYSMD3Q7Z3D4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.49■□□□□ 0.71
LYSMD3Q7Z3D4 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.49■□□□□ 0.71
LYSMD3Q7Z3D4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.49■□□□□ 0.71
LYSMD3Q7Z3D4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.49■□□□□ 0.71
LYSMD3Q7Z3D4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LYSMD3Q7Z3D4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LYSMD3Q7Z3D4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.49■□□□□ 0.71
LYSMD3Q7Z3D4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.49■□□□□ 0.71
LYSMD3Q7Z3D4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.49■□□□□ 0.71
LYSMD3Q7Z3D4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LYSMD3Q7Z3D4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.48■□□□□ 0.71
LYSMD3Q7Z3D4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LYSMD3Q7Z3D4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LYSMD3Q7Z3D4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LYSMD3Q7Z3D4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LYSMD3Q7Z3D4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
LYSMD3Q7Z3D4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
LYSMD3Q7Z3D4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.48■□□□□ 0.71
LYSMD3Q7Z3D4 AC008550.1-201ENST00000511500 884 ntBASIC19.48■□□□□ 0.71
LYSMD3Q7Z3D4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LYSMD3Q7Z3D4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.48■□□□□ 0.71
LYSMD3Q7Z3D4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LYSMD3Q7Z3D4 RARRES2P10-201ENST00000564312 460 ntBASIC19.48■□□□□ 0.71
LYSMD3Q7Z3D4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.48■□□□□ 0.71
LYSMD3Q7Z3D4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
LYSMD3Q7Z3D4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
LYSMD3Q7Z3D4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LYSMD3Q7Z3D4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LYSMD3Q7Z3D4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.48■□□□□ 0.71
LYSMD3Q7Z3D4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.47■□□□□ 0.71
LYSMD3Q7Z3D4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LYSMD3Q7Z3D4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LYSMD3Q7Z3D4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.47■□□□□ 0.71
LYSMD3Q7Z3D4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LYSMD3Q7Z3D4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LYSMD3Q7Z3D4 RPS2P4-201ENST00000476944 856 ntBASIC19.47■□□□□ 0.71
LYSMD3Q7Z3D4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LYSMD3Q7Z3D4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.47■□□□□ 0.71
LYSMD3Q7Z3D4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LYSMD3Q7Z3D4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
LYSMD3Q7Z3D4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.47■□□□□ 0.71
LYSMD3Q7Z3D4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
LYSMD3Q7Z3D4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.47■□□□□ 0.71
LYSMD3Q7Z3D4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LYSMD3Q7Z3D4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LYSMD3Q7Z3D4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LYSMD3Q7Z3D4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
LYSMD3Q7Z3D4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LYSMD3Q7Z3D4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.46■□□□□ 0.71
LYSMD3Q7Z3D4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.46■□□□□ 0.71
LYSMD3Q7Z3D4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LYSMD3Q7Z3D4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LYSMD3Q7Z3D4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LYSMD3Q7Z3D4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.46■□□□□ 0.71
LYSMD3Q7Z3D4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LYSMD3Q7Z3D4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
LYSMD3Q7Z3D4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
LYSMD3Q7Z3D4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.46■□□□□ 0.71
LYSMD3Q7Z3D4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LYSMD3Q7Z3D4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LYSMD3Q7Z3D4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LYSMD3Q7Z3D4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LYSMD3Q7Z3D4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LYSMD3Q7Z3D4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LYSMD3Q7Z3D4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.46■□□□□ 0.71
LYSMD3Q7Z3D4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.46■□□□□ 0.71
LYSMD3Q7Z3D4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.46■□□□□ 0.71
LYSMD3Q7Z3D4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.46■□□□□ 0.71
LYSMD3Q7Z3D4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.46■□□□□ 0.71
LYSMD3Q7Z3D4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LYSMD3Q7Z3D4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LYSMD3Q7Z3D4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
LYSMD3Q7Z3D4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 AP002982.1-201ENST00000492365 877 ntBASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 AF186192.3-201ENST00000583427 947 ntBASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 HLA-A-209ENST00000638375 975 ntBASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
LYSMD3Q7Z3D4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms