Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP1BQ7LBR1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
CHMP1BQ7LBR1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHMP1BQ7LBR1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHMP1BQ7LBR1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHMP1BQ7LBR1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CHMP1BQ7LBR1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHMP1BQ7LBR1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.83■□□□□ 0.45
CHMP1BQ7LBR1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.83■□□□□ 0.44
CHMP1BQ7LBR1 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP1BQ7LBR1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP1BQ7LBR1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP1BQ7LBR1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CHMP1BQ7LBR1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.83■□□□□ 0.44
CHMP1BQ7LBR1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.83■□□□□ 0.44
CHMP1BQ7LBR1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.83■□□□□ 0.44
CHMP1BQ7LBR1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.83■□□□□ 0.44
CHMP1BQ7LBR1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.83■□□□□ 0.44
CHMP1BQ7LBR1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.83■□□□□ 0.44
CHMP1BQ7LBR1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.83■□□□□ 0.44
CHMP1BQ7LBR1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP1BQ7LBR1 AC124283.5-201ENST00000624661 1809 ntBASIC17.83■□□□□ 0.44
CHMP1BQ7LBR1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP1BQ7LBR1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.83■□□□□ 0.44
CHMP1BQ7LBR1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP1BQ7LBR1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP1BQ7LBR1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP1BQ7LBR1 SMG8-203ENST00000578922 2178 ntBASIC17.83■□□□□ 0.44
CHMP1BQ7LBR1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP1BQ7LBR1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.83■□□□□ 0.44
CHMP1BQ7LBR1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP1BQ7LBR1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CHMP1BQ7LBR1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP1BQ7LBR1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP1BQ7LBR1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CHMP1BQ7LBR1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP1BQ7LBR1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.82■□□□□ 0.44
CHMP1BQ7LBR1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
CHMP1BQ7LBR1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP1BQ7LBR1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CHMP1BQ7LBR1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.82■□□□□ 0.44
CHMP1BQ7LBR1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP1BQ7LBR1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP1BQ7LBR1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP1BQ7LBR1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.82■□□□□ 0.44
CHMP1BQ7LBR1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.82■□□□□ 0.44
CHMP1BQ7LBR1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.82■□□□□ 0.44
CHMP1BQ7LBR1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP1BQ7LBR1 RPS2P4-201ENST00000476944 856 ntBASIC17.82■□□□□ 0.44
CHMP1BQ7LBR1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.82■□□□□ 0.44
CHMP1BQ7LBR1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.82■□□□□ 0.44
CHMP1BQ7LBR1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.82■□□□□ 0.44
CHMP1BQ7LBR1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.82■□□□□ 0.44
CHMP1BQ7LBR1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.82■□□□□ 0.44
CHMP1BQ7LBR1 AC124016.1-201ENST00000609552 612 ntBASIC17.82■□□□□ 0.44
CHMP1BQ7LBR1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.82■□□□□ 0.44
CHMP1BQ7LBR1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.82■□□□□ 0.44
CHMP1BQ7LBR1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CHMP1BQ7LBR1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP1BQ7LBR1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP1BQ7LBR1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP1BQ7LBR1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP1BQ7LBR1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms