Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
TUBA1AQ71U36 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TUBA1AQ71U36 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.85■□□□□ 0.45
TUBA1AQ71U36 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TUBA1AQ71U36 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TUBA1AQ71U36 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TUBA1AQ71U36 AL390961.4-201ENST00000623958 2535 ntBASIC17.84■□□□□ 0.45
TUBA1AQ71U36 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 AC142086.2-201ENST00000569753 217 ntBASIC17.84■□□□□ 0.45
TUBA1AQ71U36 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 AC100791.3-201ENST00000617619 330 ntBASIC17.84■□□□□ 0.45
TUBA1AQ71U36 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 AL032819.2-201ENST00000624543 2162 ntBASIC17.84■□□□□ 0.45
TUBA1AQ71U36 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TUBA1AQ71U36 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TUBA1AQ71U36 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
TUBA1AQ71U36 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TUBA1AQ71U36 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
TUBA1AQ71U36 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
TUBA1AQ71U36 AC087633.2-202ENST00000565166 1439 ntBASIC17.83■□□□□ 0.45
TUBA1AQ71U36 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TUBA1AQ71U36 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.45
TUBA1AQ71U36 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
TUBA1AQ71U36 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TUBA1AQ71U36 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TUBA1AQ71U36 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TUBA1AQ71U36 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TUBA1AQ71U36 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TUBA1AQ71U36 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.83■□□□□ 0.44
TUBA1AQ71U36 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.83■□□□□ 0.44
TUBA1AQ71U36 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.83■□□□□ 0.44
TUBA1AQ71U36 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
TUBA1AQ71U36 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.83■□□□□ 0.44
TUBA1AQ71U36 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.83■□□□□ 0.44
TUBA1AQ71U36 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.83■□□□□ 0.44
TUBA1AQ71U36 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TUBA1AQ71U36 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.83■□□□□ 0.44
TUBA1AQ71U36 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TUBA1AQ71U36 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TUBA1AQ71U36 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.83■□□□□ 0.44
TUBA1AQ71U36 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TUBA1AQ71U36 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TUBA1AQ71U36 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.44
TUBA1AQ71U36 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TUBA1AQ71U36 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.83■□□□□ 0.44
TUBA1AQ71U36 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
TUBA1AQ71U36 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TUBA1AQ71U36 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TUBA1AQ71U36 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TUBA1AQ71U36 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
TUBA1AQ71U36 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.82■□□□□ 0.44
TUBA1AQ71U36 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TUBA1AQ71U36 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
TUBA1AQ71U36 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TUBA1AQ71U36 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TUBA1AQ71U36 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TUBA1AQ71U36 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TUBA1AQ71U36 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TUBA1AQ71U36 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TUBA1AQ71U36 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TUBA1AQ71U36 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TUBA1AQ71U36 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.82■□□□□ 0.44
TUBA1AQ71U36 DUSP5P2-201ENST00000426873 1033 ntBASIC17.82■□□□□ 0.44
TUBA1AQ71U36 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.82■□□□□ 0.44
TUBA1AQ71U36 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.82■□□□□ 0.44
TUBA1AQ71U36 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.82■□□□□ 0.44
TUBA1AQ71U36 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.82■□□□□ 0.44
TUBA1AQ71U36 MIR4758-201ENST00000577688 71 ntBASIC17.82■□□□□ 0.44
TUBA1AQ71U36 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
TUBA1AQ71U36 AL356652.1-201ENST00000615962 565 ntBASIC17.82■□□□□ 0.44
TUBA1AQ71U36 AL589743.5-201ENST00000616611 1050 ntBASIC17.82■□□□□ 0.44
TUBA1AQ71U36 MIR2861-201ENST00000636310 90 ntBASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms