Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM53Q6P2H8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
TMEM53Q6P2H8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TMEM53Q6P2H8 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.42
TMEM53Q6P2H8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM53Q6P2H8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM53Q6P2H8 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM53Q6P2H8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM53Q6P2H8 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM53Q6P2H8 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM53Q6P2H8 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM53Q6P2H8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM53Q6P2H8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM53Q6P2H8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM53Q6P2H8 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TMEM53Q6P2H8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM53Q6P2H8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TMEM53Q6P2H8 MIPEPP3-201ENST00000412105 444 ntBASIC17.7■□□□□ 0.42
TMEM53Q6P2H8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.7■□□□□ 0.42
TMEM53Q6P2H8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM53Q6P2H8 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.7■□□□□ 0.42
TMEM53Q6P2H8 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.7■□□□□ 0.42
TMEM53Q6P2H8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
TMEM53Q6P2H8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM53Q6P2H8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TMEM53Q6P2H8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
TMEM53Q6P2H8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM53Q6P2H8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM53Q6P2H8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM53Q6P2H8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TMEM53Q6P2H8 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM53Q6P2H8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 KRT17P1-201ENST00000399211 1546 ntBASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 MIR4758-201ENST00000577688 71 ntBASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.69■□□□□ 0.42
TMEM53Q6P2H8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM53Q6P2H8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM53Q6P2H8 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM53Q6P2H8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM53Q6P2H8 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM53Q6P2H8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.68■□□□□ 0.42
TMEM53Q6P2H8 AC008894.3-201ENST00000624324 3103 ntBASIC17.68■□□□□ 0.42
TMEM53Q6P2H8 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM53Q6P2H8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM53Q6P2H8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
TMEM53Q6P2H8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
TMEM53Q6P2H8 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM53Q6P2H8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TMEM53Q6P2H8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM53Q6P2H8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
TMEM53Q6P2H8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
TMEM53Q6P2H8 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM53Q6P2H8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TMEM53Q6P2H8 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.68■□□□□ 0.42
TMEM53Q6P2H8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.68■□□□□ 0.42
TMEM53Q6P2H8 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TMEM53Q6P2H8 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM53Q6P2H8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.68■□□□□ 0.42
TMEM53Q6P2H8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.68■□□□□ 0.42
TMEM53Q6P2H8 AC124067.4-201ENST00000519691 2379 ntBASIC17.68■□□□□ 0.42
TMEM53Q6P2H8 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM53Q6P2H8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM53Q6P2H8 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM53Q6P2H8 AL391005.1-201ENST00000623953 2435 ntBASIC17.68■□□□□ 0.42
TMEM53Q6P2H8 AC020763.4-201ENST00000623414 4170 ntBASIC17.68■□□□□ 0.42
TMEM53Q6P2H8 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms