Protein–RNA interactions for Protein: Q6NSI3

FAM53A, Protein FAM53A, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53AQ6NSI3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FAM53AQ6NSI3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.04■□□□□ 0.16
FAM53AQ6NSI3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FAM53AQ6NSI3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
FAM53AQ6NSI3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
FAM53AQ6NSI3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.04■□□□□ 0.16
FAM53AQ6NSI3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
FAM53AQ6NSI3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
FAM53AQ6NSI3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FAM53AQ6NSI3 TNXA-203ENST00000507684 2038 ntBASIC16.04■□□□□ 0.16
FAM53AQ6NSI3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
FAM53AQ6NSI3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FAM53AQ6NSI3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FAM53AQ6NSI3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FAM53AQ6NSI3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.04■□□□□ 0.16
FAM53AQ6NSI3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.04■□□□□ 0.16
FAM53AQ6NSI3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.04■□□□□ 0.16
FAM53AQ6NSI3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FAM53AQ6NSI3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.04■□□□□ 0.16
FAM53AQ6NSI3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.04■□□□□ 0.16
FAM53AQ6NSI3 AC233263.1-201ENST00000578059 224 ntBASIC16.04■□□□□ 0.16
FAM53AQ6NSI3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
FAM53AQ6NSI3 AC008403.3-201ENST00000598924 454 ntBASIC16.04■□□□□ 0.16
FAM53AQ6NSI3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FAM53AQ6NSI3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.04■□□□□ 0.16
FAM53AQ6NSI3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FAM53AQ6NSI3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 TEX21P-204ENST00000641479 1693 ntBASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 UNC93B4-201ENST00000505679 747 ntBASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 RNA5SP413-201ENST00000516373 109 ntBASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FAM53AQ6NSI3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FAM53AQ6NSI3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FAM53AQ6NSI3 SDHAP1-207ENST00000440850 2000 ntBASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms