Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDKAL1Q5VV42 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDKAL1Q5VV42 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
CDKAL1Q5VV42 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDKAL1Q5VV42 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDKAL1Q5VV42 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDKAL1Q5VV42 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDKAL1Q5VV42 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDKAL1Q5VV42 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.22■□□□□ 0.99
CDKAL1Q5VV42 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.22■□□□□ 0.99
CDKAL1Q5VV42 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.22■□□□□ 0.99
CDKAL1Q5VV42 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.22■□□□□ 0.99
CDKAL1Q5VV42 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDKAL1Q5VV42 HLA-B-256ENST00000639848 1089 ntBASIC21.22■□□□□ 0.99
CDKAL1Q5VV42 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDKAL1Q5VV42 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDKAL1Q5VV42 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDKAL1Q5VV42 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.22■□□□□ 0.99
CDKAL1Q5VV42 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDKAL1Q5VV42 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDKAL1Q5VV42 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDKAL1Q5VV42 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDKAL1Q5VV42 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.22■□□□□ 0.99
CDKAL1Q5VV42 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.21■□□□□ 0.99
CDKAL1Q5VV42 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDKAL1Q5VV42 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDKAL1Q5VV42 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CDKAL1Q5VV42 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDKAL1Q5VV42 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDKAL1Q5VV42 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDKAL1Q5VV42 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.21■□□□□ 0.99
CDKAL1Q5VV42 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CDKAL1Q5VV42 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CDKAL1Q5VV42 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
CDKAL1Q5VV42 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDKAL1Q5VV42 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.21■□□□□ 0.99
CDKAL1Q5VV42 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CDKAL1Q5VV42 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.21■□□□□ 0.99
CDKAL1Q5VV42 KRT18P16-201ENST00000510337 1294 ntBASIC21.21■□□□□ 0.99
CDKAL1Q5VV42 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CDKAL1Q5VV42 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDKAL1Q5VV42 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.21■□□□□ 0.99
CDKAL1Q5VV42 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDKAL1Q5VV42 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDKAL1Q5VV42 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.21■□□□□ 0.99
CDKAL1Q5VV42 AC009113.1-201ENST00000570267 2443 ntBASIC21.21■□□□□ 0.99
CDKAL1Q5VV42 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDKAL1Q5VV42 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
CDKAL1Q5VV42 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDKAL1Q5VV42 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDKAL1Q5VV42 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.21■□□□□ 0.99
CDKAL1Q5VV42 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDKAL1Q5VV42 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDKAL1Q5VV42 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.2■□□□□ 0.99
CDKAL1Q5VV42 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKAL1Q5VV42 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.2■□□□□ 0.98
CDKAL1Q5VV42 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKAL1Q5VV42 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.2■□□□□ 0.98
CDKAL1Q5VV42 AC092368.3-202ENST00000574180 1591 ntBASIC21.2■□□□□ 0.98
CDKAL1Q5VV42 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDKAL1Q5VV42 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKAL1Q5VV42 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDKAL1Q5VV42 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.2■□□□□ 0.98
CDKAL1Q5VV42 TSPY6P-201ENST00000448518 926 ntBASIC21.2■□□□□ 0.98
CDKAL1Q5VV42 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.2■□□□□ 0.98
CDKAL1Q5VV42 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.2■□□□□ 0.98
CDKAL1Q5VV42 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.2■□□□□ 0.98
CDKAL1Q5VV42 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDKAL1Q5VV42 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CDKAL1Q5VV42 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKAL1Q5VV42 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKAL1Q5VV42 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CDKAL1Q5VV42 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CDKAL1Q5VV42 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDKAL1Q5VV42 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKAL1Q5VV42 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKAL1Q5VV42 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKAL1Q5VV42 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.2■□□□□ 0.98
CDKAL1Q5VV42 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.2■□□□□ 0.98
CDKAL1Q5VV42 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKAL1Q5VV42 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.19■□□□□ 0.98
CDKAL1Q5VV42 AC104581.1-202ENST00000635932 2618 ntBASIC21.19■□□□□ 0.98
CDKAL1Q5VV42 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKAL1Q5VV42 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CDKAL1Q5VV42 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKAL1Q5VV42 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.19■□□□□ 0.98
CDKAL1Q5VV42 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.19■□□□□ 0.98
CDKAL1Q5VV42 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.19■□□□□ 0.98
CDKAL1Q5VV42 NCF1B-203ENST00000435988 1254 ntBASIC21.19■□□□□ 0.98
CDKAL1Q5VV42 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.19■□□□□ 0.98
CDKAL1Q5VV42 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKAL1Q5VV42 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CDKAL1Q5VV42 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKAL1Q5VV42 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKAL1Q5VV42 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKAL1Q5VV42 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKAL1Q5VV42 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKAL1Q5VV42 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDKAL1Q5VV42 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms